Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Stre6g00528 | ATGGAGACCCCAGTTTCAAAAAGGTTGTTGAGAAAGAAACCCCTTTCTAGAAGCTATGATGAGAATTTGATGGATGATTATTTGGATAAACAGTTAGGTAGTTCTTCTAGGAAAAGGTTTAGAACAAAGAAGGAATTAGAGAAAGAAACAGAAAAAGAAGCCATGATCGCGCTTTCTTTAGGGTTTCCAATAGATGCATTGCTTGAAGAAGAAATTAAAGCTAATGTAGTGAGTGAGTTAGATGGTAAACAACAGAATGACTATATTGTTGTTAGAAACCATATTCTTTCAAGATGGAGAGCTAATGTGCACGCGTGGCTCTCTAAAGGTCAAATTAAGGAAACCGTAAGTAACGAGTATGGTCAACTGATACATTCAGCTTATGATTTTCTTTTGTTTAACGGTTATATTAATTTCGGGGTTTCACCGCCTTTTAAGGCTCAAATGCCCGAAGAAGCAACCGAGGGGTCTGTGATAATAATTGGTGCAGGACTCGCGGGGTTAGCTGCTGCGCGCCAGCTGTTAGCTTTTGGTTTTAAAGTGATTGTTCTAGAAGGTAGAAATAGACCCGGTGGAAGAGTTTATACGCAAAAGATGGGGCAAAAAGGTAATTTTGCTGCTGTAGATCTTGGTGGTAGTGTTATTACAGGTATTCATGCAAACCCTCTTGGTGTTTTAGCCAGACAACTTTCAATTCCTCTTCATAAAGTTAGAGATAAATGCCCGTTGTATGATCCAGAAGGTCGACCCGTTGGTGATGAAATTGATTCCAAAATAGAATTTATTTTTAACCGGCTTTTAGATAAAGTTACTGAATTTAGACAAATTATGGGCGAATCAGCTGCTGATATATCTTTAGGTTCAGTTCTTGAAAAACTTAAACAGATGTACACCGTGGCGACGACACCCGAGGAAAATCAGTTACTCGATTGGCATTTTGCAAATTTAGAATACGCAAATGCGGGTTGTCTTTCGCATCTTTCTGCTGCGTATTGGGATCAAGATGACCCGTATGAAATGGGTGGTGATCATTGTTTTCTTGCAGGTGGAAATTGGAGATTAATTGAATCATTATGTGAAGGAGTACCAATTTTTTATGAAAAAACCATTCAAACGGTTCGTTACACTAACGAAGGCGTTGAAGTGATTTCCGGTGATCAAACATATCAAGCAGATATGGTGTTATGCACCGTTCCTCTTGGTGTTTTAAAAAAACGAAGCGTAAAGTTTATACCTGAATTACCTGAAAGAAAACTAAAAGCGATTGATAGATTGGGATTTGGGTTGTTGAATAAGGTTGCGATGGTGTTTCCGTATGTTTTTTGGGGTGAAGATTTGGATACGTTTGGTTGTCTTAGTAAGAATAGTTATACGCGCGGTGAGTTTTTTTTGTTTTATGGTTATCATACGGTTTCTGGTGGTTCAGTTCTTGTTGCATTGGTTGCTGGTGAAGCTGCAAGATCTTTTGAGTCCACTCATCCTTCCACTTTACTACACCGTGTTTTAAGCATCCTCCGAGGTATATATGGTCCAAAGGGTATTGATGTACCAAATCCAATCCAATCTGTTTGTACAAAATGGGGAAATGACCCGCTTTCTTATGGATCATACTCTCATGTACGGGTTCACTCTTCAGGTAGTGATTATGACATACTTGCAGAAAATGTCGAAAACCGCCTTTTTTTCGCCGGTGAAGCCACCAACCGCCAACATCCCGCCACCATGCACGGTGCTTATTTAAGCGGTTTAAGAGAAGCTTCATGCATTTACAGAGCCACAAGAGGCGGTATCAAACAAACTCATCTCAAAAAAAGCAACCGAAAAATCGTTGGAGTTGGTGATATTCTTGTAAATCTGTTTAAATACCCGGATTTAACTTTTGGGAATTTTTATTTCGTGTTTGACCCGTCAAACCAAGACCCTAAATCAACCGGGCTTATGATGGTTACAATCGAGAGTTCGTTATGTTATGATAATGGTAAAGTTAACAACTTTCAAGATTCCGACAAGCAAGTGTTGAAGCTTTATACGATTATATCGCGTGTACAAGCGGATGAGTTGGAATCGGTTGTAGGAGGTAGTGAAAGTCGAATGACATATTTGTATAAAAACCTCGGGTTGAAATTAATGGGTTTGGACCGTTTTGCCCTTGTGGCAAATTCGTTGATTTCGAGTATTGCTACAAAAAGAGGAAGGGTTAGAAACCGTCGAATCGTTTATGGAAACCGTGTTTAA | 2235 | 39.28 | METPVSKRLLRKKPLSRSYDENLMDDYLDKQLGSSSRKRFRTKKELEKETEKEAMIALSLGFPIDALLEEEIKANVVSELDGKQQNDYIVVRNHILSRWRANVHAWLSKGQIKETVSNEYGQLIHSAYDFLLFNGYINFGVSPPFKAQMPEEATEGSVIIIGAGLAGLAAARQLLAFGFKVIVLEGRNRPGGRVYTQKMGQKGNFAAVDLGGSVITGIHANPLGVLARQLSIPLHKVRDKCPLYDPEGRPVGDEIDSKIEFIFNRLLDKVTEFRQIMGESAADISLGSVLEKLKQMYTVATTPEENQLLDWHFANLEYANAGCLSHLSAAYWDQDDPYEMGGDHCFLAGGNWRLIESLCEGVPIFYEKTIQTVRYTNEGVEVISGDQTYQADMVLCTVPLGVLKKRSVKFIPELPERKLKAIDRLGFGLLNKVAMVFPYVFWGEDLDTFGCLSKNSYTRGEFFLFYGYHTVSGGSVLVALVAGEAARSFESTHPSTLLHRVLSILRGIYGPKGIDVPNPIQSVCTKWGNDPLSYGSYSHVRVHSSGSDYDILAENVENRLFFAGEATNRQHPATMHGAYLSGLREASCIYRATRGGIKQTHLKKSNRKIVGVGDILVNLFKYPDLTFGNFYFVFDPSNQDPKSTGLMMVTIESSLCYDNGKVNNFQDSDKQVLKLYTIISRVQADELESVVGGSESRMTYLYKNLGLKLMGLDRFALVANSLISSIATKRGRVRNRRIVYGNRV | 744 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Stre6g00528 | 744 | ProSiteProfiles | SWIRM domain profile. | 47 | 148 | IPR007526 | GO:0005515(InterPro) | |
| Stre6g00528 | 744 | Pfam | Flavin containing amine oxidoreductase | 165 | 589 | IPR002937 | GO:0016491(InterPro) | |
| Stre6g00528 | 744 | SUPERFAMILY | Homeodomain-like | 49 | 150 | IPR009057 | - | |
| Stre6g00528 | 744 | SUPERFAMILY | FAD-NAD(P)-binding domain | 154 | 592 | IPR036188 | - | |
| Stre6g00528 | 744 | Gene3D | - | 158 | 587 | IPR036188 | - | |
| Stre6g00528 | 744 | Gene3D | - | 240 | 545 | - | - | |
| Stre6g00528 | 744 | Gene3D | - | 52 | 151 | IPR036388 | - | |
| Stre6g00528 | 744 | PANTHER | FLAVIN MONOAMINE OXIDASE | 61 | 590 | IPR050281 | GO:0016491(PANTHER) | |
| Stre6g00528 | 744 | SUPERFAMILY | FAD-linked reductases, C-terminal domain | 426 | 538 | - | - | |
| Stre6g00528 | 744 | Pfam | SWIRM domain | 68 | 139 | IPR007526 | GO:0005515(InterPro) | |
| Stre6g00528 | 744 | FunFam | Lysine-specific histone demethylase 1A | 52 | 152 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Stre6g00528 | K11450 | [histone H3]-N6,N6-dimethyl-L-lysine4 FAD-dependent demethylase [EC:1.14.99.66] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Stre | Stre-Chr2:110135287 | Stre6g00528 | Stre-Chr6:14515684 | dispersed | |
| Stre | Stre-Chr6:14515684 | Stre8g02343 | Stre-Chr8:83015887 | dispersed | |
| Stre | Stre-Chr2:11036770 | Stre6g00528 | Stre-Chr6:14515684 | transposed | |
| Stre | Stre-Chr2:151209299 | Stre6g00528 | Stre-Chr6:14515684 | transposed | |
| Stre | Stre-Chr2:160341055 | Stre6g00528 | Stre-Chr6:14515684 | transposed | |
| Stre | Stre-Chr6:14515684 | Stre8g02335 | Stre-Chr8:82631255 | wgd |
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| Stre | Amino_oxidase | 5e-90 | CL0063 | TR | SWI/SNF-SWI3 |