AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stre6g00530 ATGAATCGTAAAGAAAAAACTCTTTTTGGTTCTGGAGCCTGTGTCGCGATTACTGTCCTTTTATCATTAAAGTTGTTAAGAGATCATCTTGCTCATTGGAAGAAACCCAAAGAACAAAAGGCGATTTTGGTTATTATTCTGATGGCACCCATTTATGCTGTTGATTCTTATGTGGGTTTGGTTGATATTCGTGGTAGCGAGACATTTTTCGTGTTTTTGGATTCGATCAAAGAATGCTACGAGGGTTTGGTGATGGCTAAGTTTTTGGCTTTATTGTACACTTATTTGAATATTTCAATTAGCAAGAACATTGTACCAGATGAGATCAAAGGAAGAGAGATTCACCATTCATTCCCAATGACACTCTTTCAACCTCATTCGGTTCGTTTGAATCATCAAAACCTAAAGCTCCTTAAGTATTGGACATGGCAATTTGTGGTGATTCGCCCCGTGTGCTCTATTGTGATGATAATTTTGCAATTTCTTGATATATATCCCGATTGGCTTAGTTGGACAATCACTATGATCTTGAATGTATCGGTTTCTTTAGCATTATACGCGCTTGTCGTCTTCTATCATGTATTTGCTAAAGAATTGGCGCCACATAAGCCACTTGCCAAGTTCTTATGTGTCAAAGGGATCGTTTTCTTTTGTTTTTGGCAGGGAGTTGTACTTAGTGGTCTTGTGGCAGTGGGAATAATAAAATCAAATCACTTCTGGCTTGATGTCGCACATATCCAGCAAGCGTTGCAAAACGAGTTGGTGATTGTGGAAATGGTGTTTTTTTGCGATCTTTCAATTGTATGCATACTCTGCTGCACCATACAAGGATCTTGA 837 38.47 MNRKEKTLFGSGACVAITVLLSLKLLRDHLAHWKKPKEQKAILVIILMAPIYAVDSYVGLVDIRGSETFFVFLDSIKECYEGLVMAKFLALLYTYLNISISKNIVPDEIKGREIHHSFPMTLFQPHSVRLNHQNLKLLKYWTWQFVVIRPVCSIVMIILQFLDIYPDWLSWTITMILNVSVSLALYALVVFYHVFAKELAPHKPLAKFLCVKGIVFFCFWQGVVLSGLVAVGIIKSNHFWLDVAHIQQALQNELVIVEMVFFCDLSIVCILCCTIQGS 278
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stre6g00530 278 PANTHER ORGANIC SOLUTE TRANSPORTER-RELATED 7 263 IPR005178 GO:0005215(PANTHER)|GO:0006810(PANTHER)|GO:0016021(PANTHER)
Stre6g00530 278 Pfam Organic solute transporter Ostalpha 9 265 IPR005178 -
Stre6g00530 278 SMART Solute-trans-a-2 7 278 IPR005178 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stre6g00530 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Stre Stre-Chr1:125683184 Stre6g00530 Stre-Chr6:14605790 dispersed
Stre Stre-Chr6:14605790 Stre9g02440 Stre-Chr9:71933955 dispersed