AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stre6g00637 ATGGCACCTACTTCTTCATCGTTCACCTTCATCTGCAAAACTCACCTCGTAAGAACCCTAATCATCATCATCTTACTCCTCACTTGTACCCACAGTCCTAATGTACAAGCCCTTAAAGCACCAATTCGTCCACTAGATTTACTCCCCCTTTTGCCCCGTGAAATTTCATGGCCGATTCTCAACTCGCTTCGAGGCGTCGCCGATCTTATGCCGAGCTTCGTCGGCGCCGCCGCGATTGCCAATAACTCCGGTTTGCAGTGGAAAGGATCGTGTTTTTATGAGAACACTGCGTGGTTAGAGCTTCATAATAAAAGCGGTAGTGAATTTGGTGGAGGTACTCTTCATATCAAGGTTAGCAGTGCACACAGTTGGACATGTATGGATATTTATCTGTTTGCGACTCCATATCGCGTGACATGGGATTATTATTTTCTATCGCGTGAGCATACACTCGAGTTTGATGAGTGGAGCGGGAAAGCTGAGTATGAATATGTAAAACGTAAAGGAGTTGCGATTTTCCTGATGGAAGCAGGAATGTTAGGAACCCTAGAAGCATTATGGGAGGTTTTCCCATTATTCACAAATACGGGTTGGGGTGAAAGTTCAAATATTGCGTTTCTCAAAAAACATATGGGAGCTAATTTCGAGGCGCGACCCGAACCATGGGTAACAAACATAACCCAAGATGATATTCAATCGGGTGACTTTCTTGCAATTTCAAAGATCCGTGGTAGATGGGGCGGGTTTGAAACCCTTGAAAAATGGGTATCCGGGGCGTACGCGGGTCATTCTGCTATTTGCTTGAGGGATCCGCAAGGAAAACTTTGGGTTGGTGAATCTGGACATGAAGATGAAGAGGGTCAAGATGTTATTGCTTTGTTGCCATGGGACGAGTGGTGGGAATTTGAGTTGACTAAAGATGATGCGAATCCACATATTGCTTTACTTCCTTTGCATCCTGATCTACGGTCCAGATTTAATCAAACTGCCGCATGGGAGTATGCACAAACTATGGTTGGGTTGCCATACGGTTATCATAATTTGATTTTTAGTTGGATAGACACCGTCAGTGATAATTATCCGCCGCCTTTGGATGCTAATCTGGTTGCATCTGTTATGACTGTTTGGGATCAAATGCAACCTGCATATGCGGCTAATATGTGGAATGAAGCCTTAAATAAACGCCTTGGTACTCAGGGGCTTGAGCTTGCTGATATTTTGGTCGAAGTTGAAAGACGCGGTTCATCTTTTGCTGAATTACTAACTGTACCCGAACAAGATGATTGGGTATACGCGGATGGAAAGTCAACTTCTTGTGTTGCTTTTGTTCTTGAAATCTACAAAGAAGCGGGTCTTTTTGGAGATCTTGCTGATCAAATTCAAGTTACCGAGTTCACAATAAAGGACGCGTACACGCTCAACTTTTATGAAAACAATTCAGGCCGCCTGCCAAAATGGTGTAACGAAGGCGATACGGTTGATCTTCCATTTTGTCAAATCAAAGGAAAATACCGAATGGAATTACCCGGATACAATACCATTGACCCGTACCCGTATATGACTGAAAGCTGTCCATCATTACCCCCAGAGTATTCTAGACCTCAATACTGCTGA 1614 43.87 MAPTSSSFTFICKTHLVRTLIIIILLLTCTHSPNVQALKAPIRPLDLLPLLPREISWPILNSLRGVADLMPSFVGAAAIANNSGLQWKGSCFYENTAWLELHNKSGSEFGGGTLHIKVSSAHSWTCMDIYLFATPYRVTWDYYFLSREHTLEFDEWSGKAEYEYVKRKGVAIFLMEAGMLGTLEALWEVFPLFTNTGWGESSNIAFLKKHMGANFEARPEPWVTNITQDDIQSGDFLAISKIRGRWGGFETLEKWVSGAYAGHSAICLRDPQGKLWVGESGHEDEEGQDVIALLPWDEWWEFELTKDDANPHIALLPLHPDLRSRFNQTAAWEYAQTMVGLPYGYHNLIFSWIDTVSDNYPPPLDANLVASVMTVWDQMQPAYAANMWNEALNKRLGTQGLELADILVEVERRGSSFAELLTVPEQDDWVYADGKSTSCVAFVLEIYKEAGLFGDLADQIQVTEFTIKDAYTLNFYENNSGRLPKWCNEGDTVDLPFCQIKGKYRMELPGYNTIDPYPYMTESCPSLPPEYSRPQYC 537
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stre6g00637 537 Gene3D endopeptidase domain like (from Nostoc punctiforme) 224 466 - -
Stre6g00637 537 PANTHER OS01G0793500 PROTEIN 18 537 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stre6g00637 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
5184867 Stre Stre11g00124 Stre-Chr11:3451199 Stre6g00637 Stre-Chr6:18062654
5202191 Stre Stre5g02295 Stre-Chr5:95974657 Stre6g00637 Stre-Chr6:18062654