AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stre6g00648 ATGGACCCGTTGAACCAAGAAGAAGTAACACCCGATGCTACATTAATTGGTCTTGAAAAGCGAAAACGTGGGCGCCCACGAAAGGATCCGAGTGAAAAACGGGCCCGAAGAGCCCGTTTAGAAGCAACTGCTAGCATACCACCTGGATTTACACACCCAAACAACACTCCTCGAGTTGACCCGATAAATAATCCAACTGAAAGTATGGTTGGACAGATTGTAACCGGTGTTGTTCAGGCCTCTTTTGATGCGGGTTACCTGCTCGCGGTTAGGATTGGGAACTCAAAGATCACATTAACGGGTGCGGTTTTCAAACCGGGTCACACCGCACCTGTTACACCCGAAAATGACGTGGCGCCTCATGTTGAAATGATTAAACGAACCGAAATACCATTTCCGACTGATCTCCAGCCCAAACGTAGACGTAAACGAAGATCAAAAGAGAAAAATATGCAACTTGTTACGTATGTCGGGACCGGTCCGGACCATGTGGTTACAAACTCTACACCGTTGGTCCCACCGGCTGGTTCGAGAGGTACCGTGGTCCCTGTTGCTCTCCAACCGGTTAACATTTCAAACGGTCTATCCACCAACCAACCCGCACCTCATTTGCGGGCCTCACATGGCAAGCCGGTGCACTCGGTTCTTCCGTTGGCGGTTTTCCCGCCAAACAGGTCAACAAGTCAAGCGTCTGATTCTCAAACGAGCTCACACACAGAAGGGGGTAAAACGGTAAAATCAAGTGATCTGCAAGACCGAGTAGTCAAAACAGAATCAGATATGGGTGATATGAATGAACCTCTTTTTGTTGAGCCGCTGCAAACTCGACACACGGTTCATCATTTCCAACCTCCACCAGGTTTGGGAGGTTTGATGCATGGTGGGCCCGGGAGAATGACAGAGCTGTTGCAGGCTGTTCAGCAGAACATGGGTGATGACAAGGTTTCCCGAGATGGACATCCAACTGCATGCTATAACGAAAATGGTCAACCAGGAAGAATGTAA 1005 49.05 MDPLNQEEVTPDATLIGLEKRKRGRPRKDPSEKRARRARLEATASIPPGFTHPNNTPRVDPINNPTESMVGQIVTGVVQASFDAGYLLAVRIGNSKITLTGAVFKPGHTAPVTPENDVAPHVEMIKRTEIPFPTDLQPKRRRKRRSKEKNMQLVTYVGTGPDHVVTNSTPLVPPAGSRGTVVPVALQPVNISNGLSTNQPAPHLRASHGKPVHSVLPLAVFPPNRSTSQASDSQTSSHTEGGKTVKSSDLQDRVVKTESDMGDMNEPLFVEPLQTRHTVHHFQPPPGLGGLMHGGPGRMTELLQAVQQNMGDDKVSRDGHPTACYNENGQPGRM 334
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stre6g00648 334 MobiDBLite consensus disorder prediction 312 334 - -
Stre6g00648 334 MobiDBLite consensus disorder prediction 221 244 - -
Stre6g00648 334 MobiDBLite consensus disorder prediction 14 40 - -
Stre6g00648 334 MobiDBLite consensus disorder prediction 221 252 - -
Stre6g00648 334 PANTHER AT HOOK MOTIF-CONTAINING PROTEIN 1 323 IPR045881 -
Stre6g00648 334 MobiDBLite consensus disorder prediction 1 57 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stre6g00648 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
435556 Stre6g00648 Stre9g01539
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
5189486 Stre Stre1g02668 Stre-Chr1:100286452 Stre6g00648 Stre-Chr6:18482004
5238963 Stre Stre6g00648 Stre-Chr6:18482004 Stre9g01539 Stre-Chr9:27044360