AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stre6g00726 ATGTCGGAACACAGCACCGTCAGTACGGCCAGCGGGCCGGATTTCAACCTACCAGACGAGATACTATCGGTAATCCCTACCGATCCATATGACCAGCTAGATCTTGCTCGGAAGATCACTTCGATGGCGCTAGCATCACGCGTTTCGAAATTGGAGTCGGAGGCAGGGAGGTTGAGGCAGAAGTTAAACGAAAAAGATCGTGTTGTAATGGAACTTGAAGAGAAAGTTTCTGAGCTTCAGCAGACGTGTCATAATGTTCAGTTGCGGTTGCAGCTTACGCTTGAAGATAATATGAAACTTGCGGAGGAGAGAGATTCGTTGGCTGTGGCTGCTAAGAAATTAGGGCGCGATTTAGCTAAGCTGGAGGCATTCAAGAGACAGTTAATGCAATCATTGAACGATAATGATTCAGCTCCGGCAGCAACTGTAGATATAAGCACCTATGACCAATCTGTCCCCAAAGCTTATCCGGTTACAGAGGAGACAAATGACTATCGAAGGCACCATTCGTATAGTGGCTCTATTGAGAGTGGAAACATACATGATGACCCTTCAAAGGTTACGGGTCAAAGGTTTTCCGTGACACCATATATCAGCACGCGTGTAACGCCAACTGCAACCCCTAAAACAATTTCTGCACGCGTGTCTCCGAGACGGTATTCTGCTTCTGGTACTACATCCCCTACAAGAATTCAATATGACAGTCGTAACACAATGTCATCATGGTACCCATCAAGTCAGCAATCTTCAGCTGGAAACTCTCCTCCTCGTGGGCCCCCATTACCAGGCCGTGCTGCTAAGATTGATGGAAAAGAGGTCTTCCGTCAAGCAAGGAGTCGACTATCTTATGAGCAATTCAGTGCATTTTTAGCAAACATAAAGGAGTTAAATGCTCAAAAGCAATCTCGTGAGGAGACTTTGAGGAAGGCAGAAGAAATATTTGGGTCTGATAACAGAGATCTTTATCTTTCATTTCAAGCTCTACTTAATCGCAACAAACAATGA 1005 45.37 MSEHSTVSTASGPDFNLPDEILSVIPTDPYDQLDLARKITSMALASRVSKLESEAGRLRQKLNEKDRVVMELEEKVSELQQTCHNVQLRLQLTLEDNMKLAEERDSLAVAAKKLGRDLAKLEAFKRQLMQSLNDNDSAPAATVDISTYDQSVPKAYPVTEETNDYRRHHSYSGSIESGNIHDDPSKVTGQRFSVTPYISTRVTPTATPKTISARVSPRRYSASGTTSPTRIQYDSRNTMSSWYPSSQQSSAGNSPPRGPPLPGRAAKIDGKEVFRQARSRLSYEQFSAFLANIKELNAQKQSREETLRKAEEIFGSDNRDLYLSFQALLNRNKQ 334
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stre6g00726 334 Coils Coil 48 89 - -
Stre6g00726 334 Coils Coil 293 313 - -
Stre6g00726 334 MobiDBLite consensus disorder prediction 208 266 - -
Stre6g00726 334 PANTHER OS03G0659800 PROTEIN 14 332 - -
Stre6g00726 334 MobiDBLite consensus disorder prediction 208 254 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stre6g00726 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Stre Stre-Chr10:69342507 Stre6g00726 Stre-Chr6:21295311 dispersed
Stre Stre-Chr6:21295311 Stre3g00927 Stre-Chr3:12360357 transposed