AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stre6g00819 ATGGGAAACAGAAAGGAGCGTAGACATACTGCGAAGACTGCTGCTAATCGAAGAGTAAAGCTTGATCTTCTGGCGGAACCCTCTGGAGATTTTGGTGATCCGTCTAACCTAGAAGAAGCTGGAGTTGGCGGCAATGGAAGAAATCATGTCGGGTCACCCAATTCACCATCATCTTCAGGTCAAAGACCCGAAAATCCTCTGTTATTGCTTGGACAATATAGTGATGAAGAAGTTGATGAAGAATCGAGTAAAGAAATTAATCATGATGCTCGAGAAAAAACTCCAACTGTTCTGGATGAGCAGGTAAAGGTAGACAATCATGAAACTACTGAAGCAGTTGATGATGAAAATCTTTTTACTAAAAAAACTGATCAAGAGAACAAAGAACTTTCTTCAACAATGGATGTATTGCCAAATTTGGAGAAAAATATTGTAGAAGATGATAAACCCGAGTCTCCACACGGAGATGCAGATACACTGGATCCAACCTCTATTTCTTTGACACCTGGCATGCAGACAACCGTTGATGTGGATTCAGGCTGGAAAATGGTGTTGCATGAGGAGAGTAATACATATTATTACTGGAACATTGCAACCGGTGAAACTTCTTGGGAAGTTCCTGTTGATTTGACCCAAGGAAATGAGTCAACATATGATCCTAAATCTGGGCCTGAAATTGAAGAAACATATGCAACTTCTGTTGATACAAAAGCTAATAATGAATCTACAAATGGTATGGTTTTGGAGGAAAAAGAAAACGTTGGTTCTAGGATTGAATCAAAAGCGCATAATGAAAACGGTACAAATATTTTGGCAAATGGTGAACATGAGGGCTTTGTAACACAATCTTGTGATGCTTTGAGTAATGTGGAGGCCCACCATTATGATTCTGTTATTCAAGATATGAGTGACCATGTGTACGATGGGACAGGTGGTGAATTTTCTGATTCCTTTCGTCTTCTGCAAATTGGTGAAAATCTATCAGAAAGATTAAAATCTTTGGAAGGGTCTGAAGGGTTCAGTGACCAGATATCAAAGTTGAAGTTTGAACTTGATATAAGACTTGCAGACATCAAGTCACTAGTACCATATGGATCATCATTGCTTCCTTTTTGGTTGCATTCAGAAAACCAACTGAAAAATCTGGAATCTTTAATCAACAATGAAGTTTTAAAACATTCGCACTTCACCAATGCTGGCGAAATTAACGAGCCAGAAAAAAGTATTCAAGAAAACACTGTTAAATCCCAAGAAACTTCAAGTCTGGTAGATATGGGCCCACCGAATGCGGGCCACCACCCCGTGGAAGATGATGATGACATGGATGTGGAGATGGAGGTTGAAAATACTGCAATACATTCTGGAGACGAAGCGGGCCCGCAACCGGATCAACCCACATCACCAATCCGGATTGAACGAGTTTCAGACGTTCCACTTCCGCCAAATGATGACTGGATTCCACCACCACCGCCAGATGAAGAACCGTTACCGCCGCCACCACCAGACGAGCCAACTGAACCCGTGTTCCCACCACCACCATCAGAGACACAAACAACACAACCGTATTCTTATGGAGAACAATATAGTTTTCCATACCCGCAGTCAGCTTTTGAGTATTATGGTCAAACGAACTCCGCAATCTCGAGTAACGGTTATTACGTGGATGCTAACGGGTCTCATGTAGCGGCTCCCCTACCAACCGTTTATTATGCACCAGTGGTGAACCCAGAACCCGCATCATATTACACCCTACAAGACGGCACGATGCCAACCGTACCAGGCGTCAGTGGCATAGAAAGTTCCGGTTTACCAAATCCGGTTTATGAAAACATTATTTCTACATCGGTCTCGACGAATGTACCAGAAAGTTCTAGTGTACCACTTGATGATTCTACGGTGTCGGCTCCAGCTGTTGCTTTAACCGAAACGGTTCCAAGGGTTCAACCCAAAGTTACACGTAACAAAAAAAGAACGATTGCAACAGTGCCCACTTTAAGGTCGAACAAGAAAGTATCTGGCTTGGTGGATAAGTGGAAGGCTGTTAAAGAGAAATTACATGAAGACGAGGAGAATGAACCTGAAAACGCGTTAGAAGCTTTAGAAAAGAAACGACAACGAGAAATTGAGCAATGGCATGCTCAACAGATTGCATCAGGAGAAGCGAAAGACAATGCCAACTTTCAACCGCTTGGTGGCGATTGGAGAGAGAGGGTTAGGCGAAAGAGGGCTAAAAAATTAACACAAGAAGAAGAAAATGTAGCAAATGCTAGTGATGAAACAAAACAACAGCCTGATCTTGCTCAACTTTCAAAACAACTCCCAACAGGATGGCAGGCATATTGGGATGAATCATCAAAGATGGTTTATTATGGTAACTCAAAGACATCAGAGACAACATGGACTAAACCTACAAAGTAA 2418 42.06 MGNRKERRHTAKTAANRRVKLDLLAEPSGDFGDPSNLEEAGVGGNGRNHVGSPNSPSSSGQRPENPLLLLGQYSDEEVDEESSKEINHDAREKTPTVLDEQVKVDNHETTEAVDDENLFTKKTDQENKELSSTMDVLPNLEKNIVEDDKPESPHGDADTLDPTSISLTPGMQTTVDVDSGWKMVLHEESNTYYYWNIATGETSWEVPVDLTQGNESTYDPKSGPEIEETYATSVDTKANNESTNGMVLEEKENVGSRIESKAHNENGTNILANGEHEGFVTQSCDALSNVEAHHYDSVIQDMSDHVYDGTGGEFSDSFRLLQIGENLSERLKSLEGSEGFSDQISKLKFELDIRLADIKSLVPYGSSLLPFWLHSENQLKNLESLINNEVLKHSHFTNAGEINEPEKSIQENTVKSQETSSLVDMGPPNAGHHPVEDDDDMDVEMEVENTAIHSGDEAGPQPDQPTSPIRIERVSDVPLPPNDDWIPPPPPDEEPLPPPPPDEPTEPVFPPPPSETQTTQPYSYGEQYSFPYPQSAFEYYGQTNSAISSNGYYVDANGSHVAAPLPTVYYAPVVNPEPASYYTLQDGTMPTVPGVSGIESSGLPNPVYENIISTSVSTNVPESSSVPLDDSTVSAPAVALTETVPRVQPKVTRNKKRTIATVPTLRSNKKVSGLVDKWKAVKEKLHEDEENEPENALEALEKKRQREIEQWHAQQIASGEAKDNANFQPLGGDWRERVRRKRAKKLTQEEENVANASDETKQQPDLAQLSKQLPTGWQAYWDESSKMVYYGNSKTSETTWTKPTK 805
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stre6g00819 805 MobiDBLite consensus disorder prediction 1 100 - -
Stre6g00819 805 ProSitePatterns WW-rsp5-WWP domain signature. 777 803 IPR001202 GO:0005515(InterPro)
Stre6g00819 805 MobiDBLite consensus disorder prediction 397 438 - -
Stre6g00819 805 MobiDBLite consensus disorder prediction 474 527 - -
Stre6g00819 805 MobiDBLite consensus disorder prediction 48 65 - -
Stre6g00819 805 CDD WW 774 804 IPR001202 GO:0005515(InterPro)
Stre6g00819 805 ProSiteProfiles WW-rsp5-WWP domain profile. 771 805 IPR001202 GO:0005515(InterPro)
Stre6g00819 805 SMART ww-5 772 805 IPR001202 GO:0005515(InterPro)
Stre6g00819 805 SMART ww-5 176 209 IPR001202 GO:0005515(InterPro)
Stre6g00819 805 ProSitePatterns WW-rsp5-WWP domain signature. 181 207 IPR001202 GO:0005515(InterPro)
Stre6g00819 805 PANTHER OS06G0298400 PROTEIN 418 805 - -
Stre6g00819 805 Coils Coil 743 763 - -
Stre6g00819 805 MobiDBLite consensus disorder prediction 145 166 - -
Stre6g00819 805 MobiDBLite consensus disorder prediction 733 756 - -
Stre6g00819 805 ProSiteProfiles WW-rsp5-WWP domain profile. 175 209 IPR001202 GO:0005515(InterPro)
Stre6g00819 805 Gene3D - 766 805 - -
Stre6g00819 805 MobiDBLite consensus disorder prediction 81 100 - -
Stre6g00819 805 Gene3D - 175 220 - -
Stre6g00819 805 MobiDBLite consensus disorder prediction 401 424 - -
Stre6g00819 805 SUPERFAMILY WW domain 772 804 IPR036020 GO:0005515(InterPro)
Stre6g00819 805 SUPERFAMILY WW domain 168 209 IPR036020 GO:0005515(InterPro)
Stre6g00819 805 MobiDBLite consensus disorder prediction 481 517 - -
Stre6g00819 805 CDD WW 179 209 IPR001202 GO:0005515(InterPro)
Stre6g00819 805 MobiDBLite consensus disorder prediction 715 770 - -
Stre6g00819 805 Pfam WW domain 773 803 IPR001202 GO:0005515(InterPro)
Stre6g00819 805 Pfam WW domain 179 207 IPR001202 GO:0005515(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stre6g00819 K24774 formin-binding protein 4