AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stre6g00831 ATGGAAGAATCACAAGAAATTTTATTGAACTCGCTGGCAAGAGTTGGAGTTCCGATCCCGCCGGAAGTTATATCAGTTAAAGATCTAACGCCGGAATCCATGGTGTCGATCTGTGCTCATTCACTTCGTATAATTTCGAATTCGGAATCAATTCCTATTATGTTACCGGAATCTATGGCCGATCGGTTTAAATTATGCACCGATCTCGCCTCATCTGTCAAAGACCTAGGTTACATCGGCGATATGAGCTTTCATAAGTTTCTGTATCCATCTGAAGAAGACATGTATAAGTTGATAAGATTTTTGGTTGGAAGAATATCTGAATCATCTCAAACTGCAGTACTAACAGAAATAAATGACGATAATGCCACTGCAACAATAAATATAGATAATCCTGAAATATCAAACAATCATGTTGATGATAATGAGGGATTGGATTTGCATACTGAAGTTGGAAACCTGAAATTGAGAACAAATGATGATGATGAAGATGGTCAACATAAACTTGAGAAGTCAACGATTTCTTGTCAAGATAATTCGTCTCAGACAAGCAACAAGACAAAAATTTCAATAAATCAAGAAAATGTGTTCTCGGATGAAACAACCACAAAATCATTGATGTTACAACAATTGGAAGATCAACATGATTTGTTGAAAGAAGCGATAAAAATGGCTTGTGATGAACAAACCCCTTTGGAGTCCTACATTACTCAACTCAACAACCAAATAGATGTAAAGAGGCATAATCTATCACAAATGGAGTCAAAATGGAAAGAAATCATAAAGCCATTACAAGAAAAGAAAAGAAATTATGAAGAAACTTTATGTGCAAAACAATCCAAGACACAAGAAAAACATCAATGGAAAAAACTGGATCAGGATTTGGAGTCCACATTATCTGAAACAAACCAAAGAGAAAAGGAAATATCCAATTTGTCAGCAGAAATTGAGAAACTACCCAAATTAGCATCATCTAGAAGATCTTACATTGAACGGATAAAAGAGATTACTAAAAACAGTCGAAAACAGGATATTGACATCGAACGAATTTTAAAAGATACTCGAGATCTTCAATTGGAAAGTAACATGATTCAAGAACGCTTGCATCGGACTTATGCAGTGGTAGATGAAACACTTTTAAGGGAAGCGAAGAAGGAGCAAGTAGGAGAGGAAGCTCACATTTTGCTGACCACCATCCACGAGAGTTTTGGACAAATTTCACAAAAAATCCTTGCAACCGACCGAACACGTAGAGAACAAACGGATCTTGAAACTAAGCTTTCAAGTGTTGCAACCCGAAGTTTGAACTTGGATAAACTACAAGCCGATATTGATGCCATAAAGAAAGAAAACGAATACCTTGAATCTTGTTTGAGTAATCGTAACCCCTAA 1392 36.14 MEESQEILLNSLARVGVPIPPEVISVKDLTPESMVSICAHSLRIISNSESIPIMLPESMADRFKLCTDLASSVKDLGYIGDMSFHKFLYPSEEDMYKLIRFLVGRISESSQTAVLTEINDDNATATINIDNPEISNNHVDDNEGLDLHTEVGNLKLRTNDDDEDGQHKLEKSTISCQDNSSQTSNKTKISINQENVFSDETTTKSLMLQQLEDQHDLLKEAIKMACDEQTPLESYITQLNNQIDVKRHNLSQMESKWKEIIKPLQEKKRNYEETLCAKQSKTQEKHQWKKLDQDLESTLSETNQREKEISNLSAEIEKLPKLASSRRSYIERIKEITKNSRKQDIDIERILKDTRDLQLESNMIQERLHRTYAVVDETLLREAKKEQVGEEAHILLTTIHESFGQISQKILATDRTRREQTDLETKLSSVATRSLNLDKLQADIDAIKKENEYLESCLSNRNP 463
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stre6g00831 463 Coils Coil 437 457 - -
Stre6g00831 463 Coils Coil 208 228 - -
Stre6g00831 463 Coils Coil 236 256 - -
Stre6g00831 463 PANTHER JM1 PROTEIN 158 460 IPR008530 GO:0097602(PANTHER)|GO:2000060(PANTHER)
Stre6g00831 463 Pfam CCDC22 protein N-terminal domain 1 107 IPR048349 -
Stre6g00831 463 Pfam CCDC22 protein coiled-coil region 192 432 IPR048348 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stre6g00831 K23343 coiled-coil domain-containing protein 22