Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Stre9g01502	ATGAGCGTTGTAGAGAAAGAAAGCATTGAAGTGATCGCACAAAGCATCGGCGTTAGCAATTTATCGCCGGATGTCTTGCCTTCACTTGCCTCCGATATCGAATACCGGGTTCGCGAAATCATGCAGGAGGCTATAAAATGTATGCATCATGCAAAGCGAACTGCACTGACAACAGATGACGTTGATAGTGCTCTCGAATTAAGAAAAATGGAGCCGATTTATGTTGCATCCGGGAATTCTTTGCGGTTCAAAAGTGCAACCAGAAGTAAGGATTTGTTCTATATTGAGGACAAAGATGTTGAGTTTAGAGAGGTAATTGAATCCCCTCTTCCAAAAGCACCTCTAGATACTGCAGTTGTTACTCACTGGCTGGCTATTGAAGGCGTACAACCTGCGATTCCTGAAAATGCTCCACTTGAAGTTCTTGTAGCCCCAAATGATAATAGGAAACCCGATAACAAAGAAGATGGGGTTTCTATTGATGTTAAAACACCTGTGAAACATGTGCTCTCTATAGAGCTTCAGCTTTACTTTGAAAAGATAACAGACCTTACTGTAAGTCGATCAAATTCAGTTATTTTCAACAAAGCGTTGTTGAGTTTGGCGACTGATGCAGGACTCCATCCTTTGGTTCCTTATTTTATTTATTTTGTTGCTGAAGAGGTCACTCGTAATTTAAATAATTTTCAGCTTCTTTTTGCTTTAATGCGCCTTGTGAGGAGTCTTCTACAGAATCCATATCTGCACATTGAACCATATCTTCATCAACTGATGCCATCTGTCATGACGTGTCTTGTTGCAAAAAACTTGGGGAATAAGTTAACTGATAACCACTGGGAACTTAGAAACTTTACAGCTAATCTGGTGGCTTTAATATTCAGAAGGTTTGGATATGGATATCATAATCTCCAATTACGTGTTACTAGAACTCTTCTTCATTCATTTTTGGATCCCGCAAAAGCCTTATCCCAAAATTATGGTGCTATAAAAGGCATTACAGCCCTCGGATCAAGCGTGGTTCGTTTGCTTTTGCTCCCAAATCTCGATCCATATCTACAATATTTAGAACCAGAAATGCAACTTGAGAAGCAAAAGAATGAAAGCAGGAGATATGAAGCATGGCGAGTACATGGTGCCTTAATGTGTGCAGCTGGTTTATGTGTTTACAATCAACTTAAAATGAATCCCAATTTATTATCTCCACCATCACAAAACATCTGGAAAAAGAATGGGAAATTTGGGGCAACAAATTCAAACAAACGAAAGGTGTCGAGCATGAACAACTTGATGGACCAACAACCACTTAAAAAAGTAGCAACATCCGAAGGTTCACATTTAGTTAAAGTGGAGATGCAAGGATCCAGCAGTGGGTTTTCAATTACCCGTGGCGGGTCGGATTCGGGGCTCCACTCGTTACCGAGGTTTTTACCGAATGACAACTTGCCAGGTGGCGGTGCGAGGAGGGATAGGTTCGGTGGTGTGAGTCAAACATCTTCAGTTGCGGTATCGCGTGCATGGAGAAAGGAGACAAATGCTGGACACTTGCTTCCTAAACTTTATGATGTTTTTGGTCAAAGTATGTTTCCTTTTGTACCCTCACCAGAATTGTGCAACTTTCACCTCTAA	1626	41.02	MSVVEKESIEVIAQSIGVSNLSPDVLPSLASDIEYRVREIMQEAIKCMHHAKRTALTTDDVDSALELRKMEPIYVASGNSLRFKSATRSKDLFYIEDKDVEFREVIESPLPKAPLDTAVVTHWLAIEGVQPAIPENAPLEVLVAPNDNRKPDNKEDGVSIDVKTPVKHVLSIELQLYFEKITDLTVSRSNSVIFNKALLSLATDAGLHPLVPYFIYFVAEEVTRNLNNFQLLFALMRLVRSLLQNPYLHIEPYLHQLMPSVMTCLVAKNLGNKLTDNHWELRNFTANLVALIFRRFGYGYHNLQLRVTRTLLHSFLDPAKALSQNYGAIKGITALGSSVVRLLLLPNLDPYLQYLEPEMQLEKQKNESRRYEAWRVHGALMCAAGLCVYNQLKMNPNLLSPPSQNIWKKNGKFGATNSNKRKVSSMNNLMDQQPLKKVATSEGSHLVKVEMQGSSSGFSITRGGSDSGLHSLPRFLPNDNLPGGGARRDRFGGVSQTSSVAVSRAWRKETNAGHLLPKLYDVFGQSMFPFVPSPELCNFHL	541

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Stre9g01502	541	FunFam	transcription initiation factor TFIID subunit 6	1	66	-	-
	Stre9g01502	541	Pfam	TATA box binding protein associated factor (TAF)	1	65	IPR004823	-
	Stre9g01502	541	SMART	TAF-cls	2	68	IPR004823	-
	Stre9g01502	541	SUPERFAMILY	Histone-fold	2	66	IPR009072	GO:0046982(InterPro)
	Stre9g01502	541	CDD	TAF6C	167	383	IPR011442	GO:0006367(InterPro)
	Stre9g01502	541	Gene3D	Histone, subunit A	1	67	IPR009072	GO:0046982(InterPro)
	Stre9g01502	541	FunFam	Transcription initiation factor TFIID subunit 6	167	363	-	-
	Stre9g01502	541	PANTHER	TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 6	3	535	IPR037796	GO:0000124(InterPro)\|GO:0003713(PANTHER)\|GO:0005669(InterPro)\|GO:0005669(PANTHER)\|GO:0006367(InterPro)\|GO:0016251(InterPro)\|GO:0016251(PANTHER)\|GO:0046695(InterPro)\|GO:0051123(PANTHER)
	Stre9g01502	541	SUPERFAMILY	ARM repeat	195	382	IPR016024	-
	Stre9g01502	541	Gene3D	-	166	370	IPR046344	GO:0006367(InterPro)
	Stre9g01502	541	Pfam	TAF6 C-terminal HEAT repeat domain	166	348	IPR011442	GO:0006367(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Stre9g01502	K03131	transcription initiation factor TFIID subunit 6

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Stre	Stre-Chr9:26517599	Stre9g02825	Stre-Chr9:92320340	dispersed