AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stre9g01577 ATGGCAGACATCGAAACCCTAGGTATTCTTGATGAAATTCAAGCACTCGTCTCCGATAAGCTTCAAGTGGTTTCTTACAAGTGGCTGAGTAGGAATTTTTCGGTGCCATCAGATACTGCAAAGAGGCTGCTTCAAGAATTTGTGGAAAAGAATGGAAGTCAATTGGAAGTTATATATTCTCTATCTGGTTGGTTGAAAAATAATCCTGAAGCTTATCATATAAAGCTTGTTTTGGGTTCAAAACTTTCAGGAGCGAAAGAAGAATTTGGTAATGATTGTTCGGTTCAAGTCTATAGCGTTCAAGCTAGTGTTCCTAAAGATCCAGCAGTTATTTGGAATGCTGAATTTATACAATCAGAAGAATTTTTTAAAGAGCCTCCTAATGTTGTTAACTGCTTGCGTGATAATCGGTTTTGCGGTGTTTCAAATTCATTTGTAAAACGCAATATTGAGGGAACACTTGTTAACAACACTGGGGGTCCACAATTAAAAAATGCAGGAATTCACGGACAATCAAGAACTAATTTTAGTAATGAAGTTTCTGACACTTCAATTGGAAAAGAAAAAAAGATTGAGCAATCAGACCCTAAACCTAATCAAGCCATAAATGTCCAAAGTGGAAGTGTTAAAGAACAAGTTCCTCAAAGTAAAAAGAAAATACAAAATGATAAAATATCTTCTGGAAATTCAAGCTCATTAGCTAGTATGTGGGGCCGTGCATCTGCAAAACCGAAACCCGAGTCTGCCTCAGTAAAAACTGATACTGATGTTCCTATTTCCAATGATGCTCAGGTGCGTGCTAATGAATCTGTAGAGGGTGAAAGCAGTGATGATGATGGTGGTGAACAAATGAACTTCAAGAGAGCGTCTAATGGTGAAGGAAATAACAGAAAAAGAAGAGTTGTATTTGATTATTCTGATGAAGATAATGTTGAAGATGCAGTGAATCTCGCCTCACCAGATCCACCAAAAAAGCAACTTGCTCTTGATTCGAAGAAAATTTGTAGCATCGAAAATAAGAATTTGGATTTTGATGAACAGAAAGAAGTTAAGAACAAAAACGATGTATATCAAGAAGATAAAACGAGTGATGCTGCCGTTAAAAATGCAACTAAAAAGAGAAAAGTTTTGAAGACTCGAATCGATGAGCGTGGAAGAGAAGTAACTGAAGTGGTTTGGGAAGATGATGATGAGAAAGAAACAAGAACAGATGACAATACAAGAAAAGATAAAGGTGAAAATAAAACTTCAGAAAATGTTGTCAGCAGGCCGGTTGCAGCAGCTCCTAAGAAGTCACCTGCAGTAACATCACATGCAACAGGCAAGACAGGAAACAAGAAAACAAACGCAAAGGATCCGAAACAGGGGAATATTACGTCATTCTTCAAAAAGAAGGTTTAA 1401 37.04 MADIETLGILDEIQALVSDKLQVVSYKWLSRNFSVPSDTAKRLLQEFVEKNGSQLEVIYSLSGWLKNNPEAYHIKLVLGSKLSGAKEEFGNDCSVQVYSVQASVPKDPAVIWNAEFIQSEEFFKEPPNVVNCLRDNRFCGVSNSFVKRNIEGTLVNNTGGPQLKNAGIHGQSRTNFSNEVSDTSIGKEKKIEQSDPKPNQAINVQSGSVKEQVPQSKKKIQNDKISSGNSSSLASMWGRASAKPKPESASVKTDTDVPISNDAQVRANESVEGESSDDDGGEQMNFKRASNGEGNNRKRRVVFDYSDEDNVEDAVNLASPDPPKKQLALDSKKICSIENKNLDFDEQKEVKNKNDVYQEDKTSDAAVKNATKKRKVLKTRIDERGREVTEVVWEDDDEKETRTDDNTRKDKGENKTSENVVSRPVAAAPKKSPAVTSHATGKTGNKKTNAKDPKQGNITSFFKKKV 466
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stre9g01577 466 Pfam DNA polymerase subunit Cdc27 23 465 IPR019038 GO:0005634(InterPro)|GO:0006260(InterPro)|GO:0043625(InterPro)
Stre9g01577 466 MobiDBLite consensus disorder prediction 339 417 - -
Stre9g01577 466 MobiDBLite consensus disorder prediction 253 270 - -
Stre9g01577 466 MobiDBLite consensus disorder prediction 156 300 - -
Stre9g01577 466 MobiDBLite consensus disorder prediction 339 466 - -
Stre9g01577 466 MobiDBLite consensus disorder prediction 196 237 - -
Stre9g01577 466 MobiDBLite consensus disorder prediction 156 182 - -
Stre9g01577 466 Gene3D DNA polymerase delta, p66 (Cdc27) subunit, wHTH domain 7 146 IPR041913 -
Stre9g01577 466 FunFam DNA polymerase delta subunit 7 149 - -
Stre9g01577 466 PANTHER DNA POLYMERASE DELTA SUBUNIT 3 1 465 IPR019038 GO:0003887(PANTHER)|GO:0005634(InterPro)|GO:0006260(InterPro)|GO:0006271(PANTHER)|GO:0006297(PANTHER)|GO:0043625(InterPro)|GO:0043625(PANTHER)|GO:1904161(PANTHER)
Stre9g01577 466 MobiDBLite consensus disorder prediction 436 456 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stre9g01577 K03504 DNA polymerase delta subunit 3