Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Stre9g01577 | ATGGCAGACATCGAAACCCTAGGTATTCTTGATGAAATTCAAGCACTCGTCTCCGATAAGCTTCAAGTGGTTTCTTACAAGTGGCTGAGTAGGAATTTTTCGGTGCCATCAGATACTGCAAAGAGGCTGCTTCAAGAATTTGTGGAAAAGAATGGAAGTCAATTGGAAGTTATATATTCTCTATCTGGTTGGTTGAAAAATAATCCTGAAGCTTATCATATAAAGCTTGTTTTGGGTTCAAAACTTTCAGGAGCGAAAGAAGAATTTGGTAATGATTGTTCGGTTCAAGTCTATAGCGTTCAAGCTAGTGTTCCTAAAGATCCAGCAGTTATTTGGAATGCTGAATTTATACAATCAGAAGAATTTTTTAAAGAGCCTCCTAATGTTGTTAACTGCTTGCGTGATAATCGGTTTTGCGGTGTTTCAAATTCATTTGTAAAACGCAATATTGAGGGAACACTTGTTAACAACACTGGGGGTCCACAATTAAAAAATGCAGGAATTCACGGACAATCAAGAACTAATTTTAGTAATGAAGTTTCTGACACTTCAATTGGAAAAGAAAAAAAGATTGAGCAATCAGACCCTAAACCTAATCAAGCCATAAATGTCCAAAGTGGAAGTGTTAAAGAACAAGTTCCTCAAAGTAAAAAGAAAATACAAAATGATAAAATATCTTCTGGAAATTCAAGCTCATTAGCTAGTATGTGGGGCCGTGCATCTGCAAAACCGAAACCCGAGTCTGCCTCAGTAAAAACTGATACTGATGTTCCTATTTCCAATGATGCTCAGGTGCGTGCTAATGAATCTGTAGAGGGTGAAAGCAGTGATGATGATGGTGGTGAACAAATGAACTTCAAGAGAGCGTCTAATGGTGAAGGAAATAACAGAAAAAGAAGAGTTGTATTTGATTATTCTGATGAAGATAATGTTGAAGATGCAGTGAATCTCGCCTCACCAGATCCACCAAAAAAGCAACTTGCTCTTGATTCGAAGAAAATTTGTAGCATCGAAAATAAGAATTTGGATTTTGATGAACAGAAAGAAGTTAAGAACAAAAACGATGTATATCAAGAAGATAAAACGAGTGATGCTGCCGTTAAAAATGCAACTAAAAAGAGAAAAGTTTTGAAGACTCGAATCGATGAGCGTGGAAGAGAAGTAACTGAAGTGGTTTGGGAAGATGATGATGAGAAAGAAACAAGAACAGATGACAATACAAGAAAAGATAAAGGTGAAAATAAAACTTCAGAAAATGTTGTCAGCAGGCCGGTTGCAGCAGCTCCTAAGAAGTCACCTGCAGTAACATCACATGCAACAGGCAAGACAGGAAACAAGAAAACAAACGCAAAGGATCCGAAACAGGGGAATATTACGTCATTCTTCAAAAAGAAGGTTTAA | 1401 | 37.04 | MADIETLGILDEIQALVSDKLQVVSYKWLSRNFSVPSDTAKRLLQEFVEKNGSQLEVIYSLSGWLKNNPEAYHIKLVLGSKLSGAKEEFGNDCSVQVYSVQASVPKDPAVIWNAEFIQSEEFFKEPPNVVNCLRDNRFCGVSNSFVKRNIEGTLVNNTGGPQLKNAGIHGQSRTNFSNEVSDTSIGKEKKIEQSDPKPNQAINVQSGSVKEQVPQSKKKIQNDKISSGNSSSLASMWGRASAKPKPESASVKTDTDVPISNDAQVRANESVEGESSDDDGGEQMNFKRASNGEGNNRKRRVVFDYSDEDNVEDAVNLASPDPPKKQLALDSKKICSIENKNLDFDEQKEVKNKNDVYQEDKTSDAAVKNATKKRKVLKTRIDERGREVTEVVWEDDDEKETRTDDNTRKDKGENKTSENVVSRPVAAAPKKSPAVTSHATGKTGNKKTNAKDPKQGNITSFFKKKV | 466 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Stre9g01577 | 466 | Pfam | DNA polymerase subunit Cdc27 | 23 | 465 | IPR019038 | GO:0005634(InterPro)|GO:0006260(InterPro)|GO:0043625(InterPro) | |
| Stre9g01577 | 466 | MobiDBLite | consensus disorder prediction | 339 | 417 | - | - | |
| Stre9g01577 | 466 | MobiDBLite | consensus disorder prediction | 253 | 270 | - | - | |
| Stre9g01577 | 466 | MobiDBLite | consensus disorder prediction | 156 | 300 | - | - | |
| Stre9g01577 | 466 | MobiDBLite | consensus disorder prediction | 339 | 466 | - | - | |
| Stre9g01577 | 466 | MobiDBLite | consensus disorder prediction | 196 | 237 | - | - | |
| Stre9g01577 | 466 | MobiDBLite | consensus disorder prediction | 156 | 182 | - | - | |
| Stre9g01577 | 466 | Gene3D | DNA polymerase delta, p66 (Cdc27) subunit, wHTH domain | 7 | 146 | IPR041913 | - | |
| Stre9g01577 | 466 | FunFam | DNA polymerase delta subunit | 7 | 149 | - | - | |
| Stre9g01577 | 466 | PANTHER | DNA POLYMERASE DELTA SUBUNIT 3 | 1 | 465 | IPR019038 | GO:0003887(PANTHER)|GO:0005634(InterPro)|GO:0006260(InterPro)|GO:0006271(PANTHER)|GO:0006297(PANTHER)|GO:0043625(InterPro)|GO:0043625(PANTHER)|GO:1904161(PANTHER) | |
| Stre9g01577 | 466 | MobiDBLite | consensus disorder prediction | 436 | 456 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Stre9g01577 | K03504 | DNA polymerase delta subunit 3 |