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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stre9g01579 ATGACTTCTTCGTGTCCGGCGCCGGACTCCAGCCTCAACTACCGTCCGATCATCGGAATCGTCAGCCATCCCGGAGATGGTGCCTCCGGCCGGCTTAGCAATGCTACTAATGCTTCGTATATCGCTGCTTCCTATGTGAAGTTTGTTGAATCTGCCGGTGCTAGGGTTATTCCTCTCATCTACAATGAACCTCTTAGCAATCTTCAAACTAAACTCAATTTGGTCAATGGAGTGCTTTTTACAGGTGGATGGTCCAAAAGTGGTCTCTACTTTGATGTCATTGAGGGAATTTTTAAGCAAGTCCTGAAGAAGAATGATGCAGGTGAACATTTCCCGTTGCTTGCAATATGTTTGGGATTTGAACTTCTAACAATGATTATTAGCAAAAATAATAACATCCTTGAAGGCTTTAGTGCTTCAGATCAAGCATCTACACTCCAATTTATGAAGAATATTAATATTGAAGAAACATTGTTTCAAAGATTTCCTCCTGAGTTGATTGCAAAGTTGAGCACAGAATGCCTTGTGATGCAAAACCATAAATATGGTGTATCACCAGAAACATTTCAAGGTAACAAAGAACTGTGCAGCTTTTTCAAGATCTTAACTACAAGTACCGACCAAAATAACAAGGTATATGTATCAACGGTTCAATCAGAAAGCTATCCGGTGACTGCTGTCCAGTGGCACCCAGAGAAAAATGCTTTCGAGTGGGGCTCATCAATGATTCCACATTCAGATGACGCGATCCAAGTGACTCAACATGTTGCCAACTTTTTCATAAGCGAGGCAAGAAAATCATTCAACCGACCGCCTACCGAAGAAGTTTTGGCTAACCTTATTTACAATTACAGCCCCACTTATTGTGGGACCGCGGGGAAAGGATATGATGAGGTTTACATCTTTTCGGAGACTGAAAAGATTGCGCGACTGTGA 936 42.09 MTSSCPAPDSSLNYRPIIGIVSHPGDGASGRLSNATNASYIAASYVKFVESAGARVIPLIYNEPLSNLQTKLNLVNGVLFTGGWSKSGLYFDVIEGIFKQVLKKNDAGEHFPLLAICLGFELLTMIISKNNNILEGFSASDQASTLQFMKNINIEETLFQRFPPELIAKLSTECLVMQNHKYGVSPETFQGNKELCSFFKILTTSTDQNNKVYVSTVQSESYPVTAVQWHPEKNAFEWGSSMIPHSDDAIQVTQHVANFFISEARKSFNRPPTEEVLANLIYNYSPTYCGTAGKGYDEVYIFSETEKIARL 311
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stre9g01579 311 Pfam Peptidase C26 16 232 IPR011697 GO:0016787(InterPro)
Stre9g01579 311 ProSiteProfiles Gamma-glutamyl hydrolase domain profile. 7 303 IPR015527 GO:0008242(InterPro)
Stre9g01579 311 FunFam Folate gamma-glutamyl hydrolase 12 303 - -
Stre9g01579 311 PANTHER PROTEASE FAMILY C26 GAMMA-GLUTAMYL HYDROLASE 1 303 IPR015527 GO:0005773(PANTHER)|GO:0008242(InterPro)|GO:0034722(PANTHER)|GO:0046900(PANTHER)
Stre9g01579 311 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 31 246 - -
Stre9g01579 311 SUPERFAMILY Class I glutamine amidotransferase-like 39 301 IPR029062 -
Stre9g01579 311 Gene3D - 12 303 IPR029062 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stre9g01579 K01307 gamma-glutamyl hydrolase [EC:3.4.19.9]