Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Stre9g01619 | ATGTTATCATTCGACGAGAGAAGACCTGTGTTGAAACCACCTGAGTCTAAAATAGAACAAGATTCTGGTTCAACTAATTCCGGTTTGGACCCATCAAAGTTAGGTGAACAAAAAGAGAGAAATAAGGTTATTGAGTCATTAGGAGATGTATTAGAGAAAGCAGAGAAATTAGAAGCAATCAAGAACACAGAAATCCCGAATAAAAAGCTATCAACTTCACCTTCACCATCACCAAACGCAAACAACGCCAATCGGTCAACCGTTGCTCCATTAAGACCACCTCAAAGGTCCCAACCACAATTGCAATCAAAACCATCTGCAATTCCTGTTAAAAAACCACCCATTTTGAAAGATTTAGGAGCTGCTTCAAAACCTGCTGTAACTGATGAAAGTGAATCTGGTATAAAAACAAAAGAACGAAGCGGGCCAATTTTAATTGATAAATTTGCATCCAAGAGACCTGCGGTTGACCCTTTGATAGCTCAAGCGGTTTTAGCACCACCTAAACCAGGAAAGATTCCGCCTCCTGGGAAATTTAAGGATGATTTTAGAAAGAAAAGTGGTGCACCGGCCCGTGAAATACTTGGTCATCTTTATGCAAAGGGTATTAAGCCTGATGGGGTGCAAAAATTGGATAAAGAAATGGTGAAAATGGTTTGTAGGGAGTATGATGTGGAGGTTATTGATGTGGGTCCAGCTAAAATAGAGGAAATGGCGAAAAAGAAAGAGATATTAGATGAAGAAGATCTTGATAATTTACAAGATCGACCCCTGTTCTCACTATTATGGGTCATGTCGATCATGGAAAAAGCTCGTGGTGCTAGGGTTACAGATATTGCCATAATGTGCAGCTGCATAGATAGAGTCATGCAAGTTATGCAGGAACTTTCTTCAAATGGTTGCCAACCTGAAGATTGGGGTGGTGATGTACCTATGGTTCAGATCAGTGCTCTTACTGGCAAGAATGTTGATGATCTGTTGGGGAAACCACGATGCTTGTTGCAGAGCCTGCTTACAAAACTGCAAGAATTGAAAGCTAATCCTGAGAGAAATGCAAAGGGTACCGTAATTGAAGCGGGTCTTGATAAATCAAAAGGACCAGTTGCTACTTTTATCGTGCAAAATGGGACACTTAAAAAAGGGGATGTGGTTGTCTGTGGTGAAGCCTTTGGAAAGGTGCGAGCTTTATTTGATGATGCTGGAAAGCGCGTTGATGCTGCTGGACCATCAATACCAGTGCAGGTGATTGGATTAACAATGTCCCATTAG | 1269 | 41.21 | MLSFDERRPVLKPPESKIEQDSGSTNSGLDPSKLGEQKERNKVIESLGDVLEKAEKLEAIKNTEIPNKKLSTSPSPSPNANNANRSTVAPLRPPQRSQPQLQSKPSAIPVKKPPILKDLGAASKPAVTDESESGIKTKERSGPILIDKFASKRPAVDPLIAQAVLAPPKPGKIPPPGKFKDDFRKKSGAPAREILGHLYAKGIKPDGVQKLDKEMVKMVCREYDVEVIDVGPAKIEEMAKKKEILDEEDLDNLQDRPLFSLLWVMSIMEKARGARVTDIAIMCSCIDRVMQVMQELSSNGCQPEDWGGDVPMVQISALTGKNVDDLLGKPRCLLQSLLTKLQELKANPERNAKGTVIEAGLDKSKGPVATFIVQNGTLKKGDVVVCGEAFGKVRALFDDAGKRVDAAGPSIPVQVIGLTMSH | 422 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Stre9g01619 | 422 | MobiDBLite | consensus disorder prediction | 1 | 15 | - | - | |
| Stre9g01619 | 422 | CDD | IF2-mtIF2-II | 352 | 418 | IPR044145 | - | |
| Stre9g01619 | 422 | Gene3D | Translation factors | 346 | 421 | - | - | |
| Stre9g01619 | 422 | PANTHER | TRANSLATION INITIATION FACTOR IF-2-RELATED | 36 | 254 | IPR015760 | GO:0003743(PANTHER)|GO:0005737(PANTHER)|GO:0006413(PANTHER) | |
| Stre9g01619 | 422 | MobiDBLite | consensus disorder prediction | 65 | 105 | - | - | |
| Stre9g01619 | 422 | SUPERFAMILY | Translation proteins | 348 | 419 | IPR009000 | - | |
| Stre9g01619 | 422 | MobiDBLite | consensus disorder prediction | 1 | 41 | - | - | |
| Stre9g01619 | 422 | MobiDBLite | consensus disorder prediction | 18 | 32 | - | - | |
| Stre9g01619 | 422 | Pfam | Elongation factor G domain 2 | 352 | 418 | IPR053905 | - | |
| Stre9g01619 | 422 | MobiDBLite | consensus disorder prediction | 58 | 136 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Stre9g01619 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Stre | Stre-Chr9:28553390 | Stre6g00374 | Stre-Chr6:9973399 | transposed |