AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Taer1g05409 ATGGCAGCACGATTGTTGGCACACGATGTTTCCGATCTATGCCTCGGTAAGCCTCCACTAACCTCTCTCCCTATCTCCGCCACCATCCGCCACGCCTTAACCGCACTCAAATCCTCCGACGACACGCATATCACCATCTGGACCTGCGACCATTCCTCCACCCACGACTGCCGCTGCGTCGGAAAAATCTGCATGGTTGACATCATATGTTACCTTTGCAAACAAGACAACATCTCATCCCCTTCCCTCGCTCTTAGCTCCCCCGTTTCCGCTTTACTCACACATGTTCCCGGCCTCATTAAACACGTAGACCCCTCTTACAGTTTGGTTGAAGCGATTGATCTTATGATGAATGGAGCTCAGAATCTTGTGGTGCCAATAAAGAGTAAATTTTCAAAAAGAAAACAGTTATGGCAGTTACCGTCAACAGCTCCGACGATACACGCCGGTGGCCGTGAATTTTGTTGGTTAACACAAGAAGATGTGATGAGGTTTCTTCTAAGTTCAGTAGGTTTATTCTCACCAACTGCCGCATACTCAATTGAGTCACTTGGGATCATCACGACGGAGATACTCACCATCAACTACCACTCTCCGGCGTCAAAAGCAGTTGAAGCTATTTCCACCTCTCTGGCTGAGCTAACATCCGTCGCTGTCATCGACAACGACGGTGTTTTGATAGGAGAAATATCTCCTTTCACTCTCACGTACTGTGACGAAATGGTTGCGGCGGCGATCATGACGTTATCCGCCGGTGATCTTATGGCGTACATAGACTGCGGTGGCCCACCGGAGGATATAACGAGAGTTGTTGAGACGAGATTAAAAGAAAGAAATTTGAAGGGGATGTTGGACGAGTTTGCAATTTACTCGTCTTCAATACCATATTGTAATAGCAGTTGTGGTTCTTCTGATGAAGAGAGTGTGCCGTTGGCTATAACAACGAGGTCAGGGATGTATAATCGTTCGGAAAGATACTCGGCGAGGATAATGAGGAGGGCGGAGGCAATCGTGTGTCATCCGGGGAGCTCGTTGGTGGCGGTGATGGTTCAGGCGATTGCGCATCGTGTGAGTTATGTGTGGGTGATTGAAGAGGATTGTAGTGTCGTCGGAATTGTCAAGTTTTCCGGGATGTTGAAAGTTTTCCAGGAACATTTGGAGAGGATGATTGACGTATAG 1179 48.01 MAARLLAHDVSDLCLGKPPLTSLPISATIRHALTALKSSDDTHITIWTCDHSSTHDCRCVGKICMVDIICYLCKQDNISSPSLALSSPVSALLTHVPGLIKHVDPSYSLVEAIDLMMNGAQNLVVPIKSKFSKRKQLWQLPSTAPTIHAGGREFCWLTQEDVMRFLLSSVGLFSPTAAYSIESLGIITTEILTINYHSPASKAVEAISTSLAELTSVAVIDNDGVLIGEISPFTLTYCDEMVAAAIMTLSAGDLMAYIDCGGPPEDITRVVETRLKERNLKGMLDEFAIYSSSIPYCNSSCGSSDEESVPLAITTRSGMYNRSERYSARIMRRAEAIVCHPGSSLVAVMVQAIAHRVSYVWVIEEDCSVVGIVKFSGMLKVFQEHLERMIDV* 393
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Taer1g05409 392 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 18 385 IPR050511 GO:0005634(PANTHER)|GO:0005737(PANTHER)
Taer1g05409 392 SUPERFAMILY CBS-domain pair 5 121 IPR046342 -
Taer1g05409 392 SUPERFAMILY CBS-domain pair 178 388 IPR046342 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Taer1g05409 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Taer Taer-Chr11:3823767 Taer1g05409 Taer-Chr1:49584519 dispersed