AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Taer1g05416 ATGACTGGAGTGTCATTGGATTTAAGAACACAGAGTTATGGATCACCGCAGCAGCCGCAAAACGGTTTGTTGCAGACTCAAAACGGCTTCACTGCACGCAAACCTTCAAGGGTGTCCCTCTCTGGTTCAAGGGAGAAAGATAAATTTCTTCCTTTTTTGTGTAGATATCTTAGTAGAAAGAAGATTGTTATGATGATTTTAGCTTCGTTTGCACTCATGGCTTTCCTATCAGGGTTCTTTACTGCCAATAGAGAAGATGCATCAGAGAGCACGATCTTCAATCATTTTAGCGATGCTTATAACACCTCATTACAGTTCTCCAGAACGTTTCATAGTCAGAAAGATGATAATTCTGATATACAAAGCATGCTGTCTGTATGCGAAGAAAACCCTCCGACCCACCATTCGTTCGTTGCATCAGATTCCACCGGATCCATCCCTTCTCATAGCAATTTATGTCAGAATTTTGCATTTCCACCCCCTCCTCCAGGTGACAGGAGACGACCTGGACCTAGACCTTGTCCTGTATGCTACCTTCCAGTGGAGGAAGCTATGGCTAGCATGCCAAGAACCACGTCAGTGTCACCTGTTCTTCAACACTTAACTTATTTTCATGAGGAAACTTCTATCAAAACCGAACCACATGAAGGCTCGGATTTTGGTGGGTATCCTTCCATAAAGCAAAGGAATGAATCTTTTGATATTAAAGAATCCATGACTGTACATTGTGGGTTTGTAAAAGGCTGCAGACCTGGTTACAAAACCGGATTTGATATCGATGTATCTGATCTTGTGGAGTTGGAGCAATCTCATGATGTTATTGTTGCATCAGCCATATTTGGAAACTATGATGTAATTCAGCAGCCAACTAAGATTAGTGAGGCTGCAAGTAAAAACATACCATTTTATATGTTTATTGATGAGGAAACTGAAGAATATATGAGAAATTCTAGCTCTTTGGACTACAGAATGAAGGTTGGGTTATGGAGAATTATTGTTGTTCATAATGTTCCTTACATGGATTCTAGACGAAATGGAAAGGTCCCAAAGCTTTTACTACACAGACTCTTCCCAAATGTTCGGTATTCTATATGGATTGACGGGAAGCTGCAACTCGTTGTGGACCCATATCAACTTCTTGAAAGGTTTTTGTGGCGCCACAATGCTACTTTTGCTATTTCAAAACATTATAGGCGGTTTGATGTGTTTGATGAAGCTGAAGCTAATAAAGCTGCAGGGAAATACGACAATGCATCCATTGATTACCAGATTAATTTTTACAGAAACGAAGGTTTAACGCCTTATTCTGACGCTAAGCTTCCTATAATCAGCGATGTTCCGGAAGGTTGTGTCATCATAAGAGAACATATTCCAATAACGAATCTCTTCACGTGTCTGTGGTTCAATGAAGTTGACCGATTTACTTCAAGAGATCAATTAAGTTTCTCTACTGTAAGAGACAAAATCATGTCTCAAGTCAACTGGAGTATTAATATGTTTATGGATTGTGAAAGACGGAATTTTGTGATACAGGCATACCATAGAGATCTACTAGAGCACATGCCACCACCTGCGCCTAAAATTATTAGTATAAAACGGGCACGGCCTGTTACAGTTCCTGTACCCATGAGGAGGGGTAATGATTCATCTACCAAAAGTCTAGTAAAGAAAAACGTTGTTAAGCGTGGGAAAGGAGAGAGGAGATCTCGTTCTAGAAGGCATTCTAAAAATCCCGGCAATAGGGACAACACAATCATCTGA 1761 40.37 MTGVSLDLRTQSYGSPQQPQNGLLQTQNGFTARKPSRVSLSGSREKDKFLPFLCRYLSRKKIVMMILASFALMAFLSGFFTANREDASESTIFNHFSDAYNTSLQFSRTFHSQKDDNSDIQSMLSVCEENPPTHHSFVASDSTGSIPSHSNLCQNFAFPPPPPGDRRRPGPRPCPVCYLPVEEAMASMPRTTSVSPVLQHLTYFHEETSIKTEPHEGSDFGGYPSIKQRNESFDIKESMTVHCGFVKGCRPGYKTGFDIDVSDLVELEQSHDVIVASAIFGNYDVIQQPTKISEAASKNIPFYMFIDEETEEYMRNSSSLDYRMKVGLWRIIVVHNVPYMDSRRNGKVPKLLLHRLFPNVRYSIWIDGKLQLVVDPYQLLERFLWRHNATFAISKHYRRFDVFDEAEANKAAGKYDNASIDYQINFYRNEGLTPYSDAKLPIISDVPEGCVIIREHIPITNLFTCLWFNEVDRFTSRDQLSFSTVRDKIMSQVNWSINMFMDCERRNFVIQAYHRDLLEHMPPPAPKIISIKRARPVTVPVPMRRGNDSSTKSLVKKNVVKRGKGERRSRSRRHSKNPGNRDNTII* 587
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Taer1g05416 586 Pfam TOD1-MUCI70, glycosyltransferase-like domain 201 514 IPR048354 -
Taer1g05416 586 PANTHER ALKALINE CERAMIDASE-RELATED 41 548 IPR006852 -
Taer1g05416 586 MobiDBLite consensus disorder prediction 1 28 - -
Taer1g05416 586 MobiDBLite consensus disorder prediction 557 575 - -
Taer1g05416 586 MobiDBLite consensus disorder prediction 539 586 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Taer1g05416 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Taer Taer-Chr1:49632333 Taer6g00125 Taer-Chr6:846896 dispersed
Taer Taer-Chr1:49632333 Taer9g01036 Taer-Chr9:7272974 transposed