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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Taer1g05418 ATGACCAATGATCTGCTGCCTTTTGGTGACGGTGACAACCTTGTAGAAACTGACGGTGATCATTCAAAGAAGGATAAACATAGGGAGAAGAAGAGCAAATCAGAGTCAAAAGAAGGCAGAGAAACAGACGGTGACCGTTTAAAGAAGGAAAAAAAGGATAAGAATAGGGAGAAGACGGGGAAATCAGAATCAAAAGAAGATGTAGAAACAGATGGTGATCATTCAAAGAAGAAAAAAAAGGATAAACATAGGGAGAAGACAGGGAAATTTGAATCAAAAGAAGGTGTAGATGAAGATCAACATGATACAAGTAATTTAGTAAATGATGATTTACAGAAGAAGAATAAAAAAAGGAAGAGAAAACATTCTTCTGAGAAAGCAGAAATAAAAGAAATGGAAATGGATCAAGATGATGCGCCTGGTGAAGAGAAAGAGTGTGACCCAAAGCTTGAAAAGAAGAAAACGAATATTGTGAAGGATGGTTCGGAAGATACATCCAAGAAAACCGACAAGAAAAAGAAAAGGAAGAAAGATGGTAAAAGTTTAGAGGCCGAAACGAACATAAGTATGACTGAGGAATCTACTCTTAAGGCCCAAGATATGGAAGACAAATCCACGAAGAAACGAAAGATCAAAGTGAAAGATAGTAAAGTTAAAAATAAGACAAGTGAGTCTGTTGAAAACAATACAGAGAAACCTAAAGCAAAATCAAAATCAAAATCCAAGAAAGTTAGCTTCTCAGGTCACGTAGAGGTATTCCCAACGTCAGACTCACAACCAGAGAAAGAAACAACAGAAGGAGACGGTTTAATACGAGGTAAGAGATTTACACCAGAAGAAGATGAAATTGTGAAACAAGCTGTTCTTGATTATATAACTGTAAAAGGTTTGGGAGACGATGGTTTAAAGAGAGTCTTAAACTGTAGATCTTACCGTGGGATGAAAAAGTGCTGGCAAGAAATCGGGCTTTGCCTACCGAACCGCCCTTCTACAGCTGTCTATTACCGGGCCCACATTTTGTTTGAACGGGGTGAAACCCGGTCATGGTCAGCAGAAGAGATTGAATTGTTGAGGGAATTTCATGAAAAATATGGTAACGATTGGAAGAAATTAGCGGAGGAACTTGGTAAGCACAGGTTTCATGTAAAGGACACATGGAGAAGAATCAAACTAGAGAATTTAAAAAACGGAAGATGGAGTCAAGAAGAGTACCAAAACTTACACGATCTTGTGAATTTGGATTTACAAATGAAAATTAGCGGTGAAGAGGAAAAAATGTCAAAGCACGGGATGTTGAGAGATAATATTCCATGGACTGCAATTAGCGAGAAGTTATCGACTAGAACTGATGCAACATGTTGCAGGAAGTGGTATAATCAACTGACATCGTCACTTGTTGCTGAAAAGAAATGGAGCGATGCTGATGATTATCGAATGATTGGTGCACTTTATGAAATAGATGCTGCTTGTGTTGATGATGTTGATTGGGATGATCTGCTTGAACATAGGCCTGGTGAGATATGTTTAAAAAGATGGAATCAAATGGTGAAACACATAGGGGATTATAGGAGTAAATCGTTTGGTGAACAAGTCGACATATTGGCTAAACGTTATTGCCCGGATTTAGCAGAGATCAGAGAGGATTGGGACAGCAAACCTGTTGTGCCATAA 1671 38.36 MTNDLLPFGDGDNLVETDGDHSKKDKHREKKSKSESKEGRETDGDRLKKEKKDKNREKTGKSESKEDVETDGDHSKKKKKDKHREKTGKFESKEGVDEDQHDTSNLVNDDLQKKNKKRKRKHSSEKAEIKEMEMDQDDAPGEEKECDPKLEKKKTNIVKDGSEDTSKKTDKKKKRKKDGKSLEAETNISMTEESTLKAQDMEDKSTKKRKIKVKDSKVKNKTSESVENNTEKPKAKSKSKSKKVSFSGHVEVFPTSDSQPEKETTEGDGLIRGKRFTPEEDEIVKQAVLDYITVKGLGDDGLKRVLNCRSYRGMKKCWQEIGLCLPNRPSTAVYYRAHILFERGETRSWSAEEIELLREFHEKYGNDWKKLAEELGKHRFHVKDTWRRIKLENLKNGRWSQEEYQNLHDLVNLDLQMKISGEEEKMSKHGMLRDNIPWTAISEKLSTRTDATCCRKWYNQLTSSLVAEKKWSDADDYRMIGALYEIDAACVDDVDWDDLLEHRPGEICLKRWNQMVKHIGDYRSKSFGEQVDILAKRYCPDLAEIREDWDSKPVVP* 557
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Taer1g05418 556 Pfam Myb-like DNA-binding domain 349 407 - -
Taer1g05418 556 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 347 394 IPR017930 -
Taer1g05418 556 SUPERFAMILY Homeodomain-like 441 524 IPR009057 -
Taer1g05418 556 MobiDBLite consensus disorder prediction 142 169 - -
Taer1g05418 556 CDD SANT 348 377 IPR001005 -
Taer1g05418 556 PANTHER GB|AAC33480.1 23 555 - -
Taer1g05418 556 MobiDBLite consensus disorder prediction 85 113 - -
Taer1g05418 556 Gene3D - 350 388 - -
Taer1g05418 556 SMART sant 345 392 IPR001005 -
Taer1g05418 556 SMART sant 272 343 IPR001005 -
Taer1g05418 556 SMART sant 395 463 IPR001005 -
Taer1g05418 556 ProSiteProfiles Myb-like domain profile. 391 461 IPR001005 -
Taer1g05418 556 SUPERFAMILY Homeodomain-like 347 405 IPR009057 -
Taer1g05418 556 MobiDBLite consensus disorder prediction 217 235 - -
Taer1g05418 556 ProSiteProfiles Myb-like domain profile. 463 516 IPR001005 -
Taer1g05418 556 MobiDBLite consensus disorder prediction 1 274 - -
Taer1g05418 556 ProSiteProfiles Myb-like domain profile. 348 390 IPR001005 -
Taer1g05418 556 MobiDBLite consensus disorder prediction 14 78 - -
Taer1g05418 556 Gene3D - 389 466 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Taer1g05418 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Taer Taer-Chr1:49640815 Taer7g00415 Taer-Chr7:2650956 dispersed
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Gene Family Members

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Taer1g00254 . 1 364 MYB Transcription Factor family AT1G09540 44.156 6.39e-92 278.0
Taer1g00637 . 9 195 MYB Transcription Factor family AT3G53200 50.267 1.09e-57 181.0
Taer1g00929 . 29 335 MYB Transcription Factor family AT3G08500 45.11 9.75e-71 221.0
Taer1g00986 . 23 214 MYB Transcription Factor family AT3G13540 45.833 3.46e-39 132.0
Taer1g01160 . 3 231 MYB Transcription Factor family AT4G13480 55.411 8.43e-76 228.0
Taer1g01450 . 69 112 MYB Transcription Factor family AT5G35550 59.091 3.74e-14 63.2
Taer1g01529 . 1 132 MYB Transcription Factor family AT5G26660 77.778 1.49e-74 232.0
Taer1g01566 . 4 317 MYB Transcription Factor family AT3G28470 38.857 4.65e-50 177.0
Taer1g02042 . 1 355 MYB Transcription Factor family AT1G63910 49.041 2.65e-101 300.0
Taer1g02051 . 88 283 MYB Transcription Factor family AT4G12350 37.931 1.90e-31 113.0
Taer1g02054 . 1 88 MYB Transcription Factor family AT4G12350 90.909 6.48e-56 172.0
Taer1g02128 . 1 181 MYB Transcription Factor family AT5G49330 61.878 7.48e-71 221.0
Taer1g02129 . 1 160 MYB Transcription Factor family AT2G47460 65.644 7.17e-72 225.0
Taer1g02483 . 12 131 MYB Transcription Factor family AT5G26660 69.167 2.07e-59 191.0
Taer1g02838 . 101 298 MYB Transcription Factor family AT5G58850 53.846 2.61e-65 216.0
Taer1g03114 . 1 240 MYB Transcription Factor family AT2G31180 49.187 7.94e-76 228.0
Taer1g03428 . 17 282 MYB Transcription Factor family AT1G68320 47.387 1.04e-78 238.0
Taer1g03661 . 1 282 MYB Transcription Factor family AT4G38620 53.776 1.67e-108 315.0
Taer1g03726 . 1 270 MYB Transcription Factor family AT3G23250 40.647 2.72e-57 183.0
Taer1g03773 . 1 184 MYB Transcription Factor family AT5G16770 46.739 1.11e-53 172.0
Taer1g03826 . 1 120 MYB Transcription Factor family AT1G06180 63.333 1.76e-50 163.0
Taer1g04365 . 1 175 MYB Transcription Factor family AT4G09460 49.735 1.32e-60 190.0
Taer1g04454 . 65 438 MYB Transcription Factor family AT5G02320 40.955 2.18e-82 263.0
Taer1g04637 ACH 214 341 MYB Transcription Factor family AT4G18770 57.692 2.62e-47 163.0
Taer1g04640 . 17 226 MYB Transcription Factor family AT3G27810 63.333 1.24e-87 255.0
Taer1g04682 . 1 315 MYB Transcription Factor family AT3G28470 47.634 2.23e-83 252.0
Taer1g04712 . 1 326 MYB Transcription Factor family AT5G15310 51.562 2.55e-117 342.0
Taer1g04745 . 28 150 MYB Transcription Factor family AT3G30210 74.4 1.96e-64 199.0
Taer1g04835 . 9 320 MYB Transcription Factor family AT4G37260 47.658 1.25e-94 283.0
Taer1g04863 . 1 308 MYB Transcription Factor family AT3G49690 47.112 2.36e-82 250.0
Taer1g04865 . 1 134 MYB Transcription Factor family AT5G65790 83.333 5.77e-82 251.0
Taer1g04879 . 8 148 MYB Transcription Factor family AT1G66370 58.865 6.77e-56 177.0
Taer1g04880 . 8 148 MYB Transcription Factor family AT1G66370 63.121 1.76e-59 186.0
Taer1g05039 . 1 116 MYB Transcription Factor family AT5G65230 62.931 5.86e-48 159.0
Taer1g05137 . 1 327 MYB Transcription Factor family AT5G16600 47.645 2.87e-92 276.0
Taer1g05418 . 47 170 MYB Transcription Factor family AT4G00540 26.241 1.38e-07 52.4
Taer1g05514 . 8 115 MYB Transcription Factor family AT1G66370 75.0 5.18e-57 181.0
Taer1g05515 . 8 120 MYB Transcription Factor family AT1G66370 53.982 2.08e-34 121.0
Taer1g05645 . 7 164 MYB Transcription Factor family AT2G32460 65.823 2.82e-69 226.0
Taer1g06331 . 1 119 MYB Transcription Factor family AT4G01680 79.832 5.68e-68 206.0
Taer1g06635 . 1 169 MYB Transcription Factor family AT5G15310 83.041 5.52e-102 299.0
Taer1g07038 . 17 226 MYB Transcription Factor family AT3G27810 60.0 4.30e-83 243.0
Taer2g00010 . 1 150 MYB Transcription Factor family AT1G34670 68.59 2.71e-70 220.0
Taer2g00221 . 2 240 MYB Transcription Factor family AT1G17950 53.061 2.23e-79 236.0
Taer2g01482 . 1 124 MYB Transcription Factor family AT3G49690 89.516 4.70e-82 251.0
Taer2g01512 . 3 244 MYB Transcription Factor family AT1G17950 47.744 2.17e-69 213.0
Taer2g01883 . 1 263 MYB Transcription Factor family AT5G14340 52.273 3.07e-84 251.0
Taer2g01930 ACH 157 340 MYB Transcription Factor family AT4G18770 51.042 5.99e-62 200.0
Taer2g02039 . 1 323 MYB Transcription Factor family AT3G28910 49.555 4.56e-106 311.0
Taer2g02127 . 26 228 MYB Transcription Factor family AT3G30210 52.113 8.73e-64 198.0
Taer2g02291 . 9 277 MYB Transcription Factor family AT4G37260 54.015 1.47e-90 269.0
Taer2g02447 . 1 361 MYB Transcription Factor family AT2G37630 45.05 3.21e-104 310.0
Taer2g02706 . 2 106 MYB Transcription Factor family AT3G50060 78.095 3.46e-58 184.0
Taer2g02924 . 1 333 MYB Transcription Factor family AT3G47600 50.824 7.27e-109 318.0
Taer3g00133 . 29 338 MYB Transcription Factor family AT3G08500 44.848 1.18e-74 232.0
Taer3g00176 . 1 118 MYB Transcription Factor family AT5G57620 88.983 4.06e-77 238.0
Taer3g00326 . 219 688 MYB Transcription Factor family AT3G18100 50.947 1.40e-158 477.0
Taer3g00327 . 70 172 MYB Transcription Factor family AT3G18100 33.613 2.44e-07 46.2
Taer4g00795 . 1 236 MYB Transcription Factor family AT5G49330 50.622 1.31e-68 213.0
Taer4g00912 . 12 296 MYB Transcription Factor family AT5G58850 42.157 2.55e-68 219.0
Taer4g01232 . 3 226 MYB Transcription Factor family AT3G46130 54.274 9.94e-75 226.0
Taer4g01448 . 3 106 MYB Transcription Factor family AT3G50060 77.885 2.83e-58 184.0
Taer4g01535 . 1 278 MYB Transcription Factor family AT4G37260 48.41 2.06e-74 228.0
Taer4g02353 . 1 122 MYB Transcription Factor family AT5G49330 78.689 4.35e-68 211.0
Taer5g00105 . 1 349 MYB Transcription Factor family AT4G21440 54.447 5.82e-115 336.0
Taer5g00344 . 1 237 MYB Transcription Factor family AT3G23250 41.2 3.28e-55 177.0
Taer5g00448 . 1 282 MYB Transcription Factor family AT4G38620 53.722 5.30e-107 311.0
Taer5g00524 . 9 251 MYB Transcription Factor family AT3G23250 42.276 2.58e-51 169.0
Taer5g00748 . 17 226 MYB Transcription Factor family AT3G27810 61.905 5.27e-86 251.0
Taer5g00778 . 1 315 MYB Transcription Factor family AT3G28470 49.051 4.59e-84 253.0
Taer5g00808 . 1 326 MYB Transcription Factor family AT5G15310 50.914 2.05e-114 334.0
Taer5g00923 . 1 130 MYB Transcription Factor family AT5G57620 79.231 7.70e-78 239.0
Taer5g01024 . 12 117 MYB Transcription Factor family AT3G12820 65.094 3.21e-49 160.0
Taer5g01090 . 1 200 MYB Transcription Factor family AT1G66230 64.115 2.74e-91 272.0
Taer5g01123 . 1 192 MYB Transcription Factor family AT1G34670 71.795 5.33e-94 281.0
Taer5g01295 . 3 273 MYB Transcription Factor family AT4G37260 46.099 4.05e-70 216.0
Taer5g02070 . 1 346 MYB Transcription Factor family AT4G21440 43.681 6.42e-84 256.0
Taer5g02100 . 3 129 MYB Transcription Factor family AT4G05100 62.992 1.83e-52 171.0
Taer5g02101 . 3 118 MYB Transcription Factor family AT3G23250 59.322 2.40e-47 157.0
Taer5g02451 . 7 297 MYB Transcription Factor family AT3G60460 44.615 1.32e-72 228.0
Taer5g02815 . 3 340 MYB Transcription Factor family AT3G08500 44.382 2.44e-72 226.0
Taer5g02865 . 1 269 MYB Transcription Factor family AT3G23250 38.376 1.55e-53 173.0
Taer5g03305 . 1 326 MYB Transcription Factor family AT5G15310 47.753 7.54e-91 271.0
Taer5g03313 . 95 219 MYB Transcription Factor family AT1G69560 82.4 2.72e-74 232.0
Taer5g03329 . 20 436 MYB Transcription Factor family AT1G14350 53.226 1.66e-144 417.0
Taer6g01213 . 18 481 MYB Transcription Factor family AT3G09370 45.472 7.11e-131 390.0
Taer6g01437 . 68 241 MYB Transcription Factor family AT5G58850 46.857 4.50e-50 172.0
Taer6g02293 . 11 113 MYB Transcription Factor family AT4G37260 75.728 2.99e-55 179.0
Taer6g03598 . 9 274 MYB Transcription Factor family AT4G37260 49.11 1.48e-79 241.0
Taer7g00297 . 6 166 MYB Transcription Factor family AT5G14750 50.307 4.43e-53 167.0
Taer7g00415 . 32 185 MYB Transcription Factor family AT4G32730 27.778 5.73e-09 55.8
Taer7g01791 . 1 295 MYB Transcription Factor family AT5G57620 51.515 8.60e-97 288.0
Taer7g01986 . 1 88 MYB Transcription Factor family AT2G36890 77.273 1.15e-48 154.0
Taer7g02031 . 1 206 MYB Transcription Factor family AT4G38620 46.33 3.58e-61 193.0
Taer7g02108 . 1 278 MYB Transcription Factor family AT3G61250 60.396 4.26e-117 337.0
Taer7g02285 . 1 274 MYB Transcription Factor family AT3G23250 48.571 2.14e-77 234.0
Taer7g02484 . 1 265 MYB Transcription Factor family AT4G22680 57.037 5.13e-94 276.0
Taer7g02587 . 1 168 MYB Transcription Factor family AT3G23250 54.286 1.26e-59 188.0
Taer7g02758 . 1 282 MYB Transcription Factor family AT4G38620 58.17 2.21e-107 311.0
Taer8g01293 . 1 824 MYB Transcription Factor family AT1G09770 73.786 0.0 1180.0
Taer8g01484 . 1 278 MYB Transcription Factor family AT3G61250 46.575 5.81e-80 248.0
Taer8g02042 . 1 180 MYB Transcription Factor family AT5G14340 61.081 1.09e-80 240.0
Taer8g02177 . 104 223 MYB Transcription Factor family AT1G69560 81.667 3.96e-74 231.0
Taer8g02187 . 10 187 MYB Transcription Factor family AT5G15310 70.225 2.69e-85 258.0
Taer8g02379 . 17 286 MYB Transcription Factor family AT1G68320 51.079 1.09e-85 257.0
Taer9g01848 . 11 332 MYB Transcription Factor family AT5G58850 42.733 2.58e-65 216.0
Taer9g02285 . 98 121 MYB Transcription Factor family AT1G74080 83.333 5.12e-09 50.4
Taer9g02673 . 3 340 MYB Transcription Factor family AT3G08500 43.49 2.07e-75 233.0
Taer9g02871 . 1 207 MYB Transcription Factor family AT4G38620 57.277 1.01e-77 234.0
Taer9g03026 . 6 253 MYB Transcription Factor family AT4G13480 49.407 1.76e-78 235.0
Taer9g03125 . 19 436 MYB Transcription Factor family AT1G14350 52.644 1.54e-140 407.0
Taer10g00080 . 1 268 MYB Transcription Factor family AT3G61250 43.617 4.36e-65 204.0
Taer10g00216 . 1 115 MYB Transcription Factor family AT4G28110 71.304 1.26e-58 184.0
Taer10g00301 . 11 146 MYB Transcription Factor family AT4G37260 63.971 2.81e-56 180.0
Taer10g00334 . 52 360 MYB Transcription Factor family AT3G55730 48.867 1.36e-94 284.0
Taer10g00707 . 1 119 MYB Transcription Factor family AT5G65790 83.193 3.97e-74 232.0
Taer10g00885 . 1 119 MYB Transcription Factor family AT5G57620 84.034 3.38e-74 231.0
Taer10g01235 . 6 279 MYB Transcription Factor family AT4G37260 48.193 1.26e-91 275.0
Taer10g01335 . 9 114 MYB Transcription Factor family AT1G06180 38.679 5.80e-14 66.6
Taer10g01851 . 11 290 MYB Transcription Factor family AT3G12720 51.034 2.08e-84 256.0
Taer10g02525 . 1 498 MYB Transcription Factor family AT3G11440 35.714 6.72e-75 246.0
Taer11g00233 . 1 171 MYB Transcription Factor family AT5G56110 88.304 2.43e-113 329.0
Taer11g00540 . 1 144 MYB Transcription Factor family AT5G26660 77.241 4.74e-79 243.0
Taer11g00553 . 84 416 MYB Transcription Factor family AT4G18770 43.86 5.13e-79 247.0
Taer11g00626 . 1 333 MYB Transcription Factor family AT3G47600 52.459 1.10e-113 332.0
Taer11g01304 . 19 259 MYB Transcription Factor family AT4G32730 69.71 1.06e-113 362.0
Taer11g01378 . 25 298 MYB Transcription Factor family AT5G49620 57.143 9.92e-96 284.0
Taer11g01613 . 1 282 MYB Transcription Factor family AT4G12350 56.383 7.75e-103 299.0
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Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
Taer Myb_DNA-bind_6 3.7e-11 CL0123 TF MYB-related