AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Taer1g05422 ATGGAGATCATATCACCACCACAACATGACGACCAAAACCCATCTCCGTCCAGCATCAACAGCACAGCCCAAACACCACCACTAACTCCAAGACCCATTTCAAGATCCGAACCAAATCCATACCCAACAACGTTCGTTCAAGCCGACACCACTTCCTTCAAACAAGTAGTTCAAATGCTAACCGGATCATCCAAACCGGCCCAACAACAACCAGATCCATATTCTTCTAAAATATCCATACCGCCGATCAAAACTGGTCAACAGAAGAAACAAGGTTTCAAACTCTATGAACGCAGAAACAGTTTAAAAAACGGGTTGATGATTAACCCATCAGTGTCTAAATCCGGTTACGGAAACGGGTTATCGCCACGTGTCTATGAAATGTTGTCTCCAAGCATTCTTGATTTTCCGGCGCTTGTTTTAAGTCCGGTGACGCCATTGAAAGAAGATCCGTTTAATAAATCTTCATCGTCGGAGGAGGAGGAGAGAGTCATTGCGGAAAAAGGGTTTTATTTACATCCGTCTCCGAGACCGGCGACACCACATGCGACGGCGGAGCCACAGTTGCTGCCACTTTTTCCGGTGACATCGCCGAGGGTATCGAATTCGTCTGTTTAG 618 46.28 MEIISPPQHDDQNPSPSSINSTAQTPPLTPRPISRSEPNPYPTTFVQADTTSFKQVVQMLTGSSKPAQQQPDPYSSKISIPPIKTGQQKKQGFKLYERRNSLKNGLMINPSVSKSGYGNGLSPRVYEMLSPSILDFPALVLSPVTPLKEDPFNKSSSSEEEERVIAEKGFYLHPSPRPATPHATAEPQLLPLFPVTSPRVSNSSV* 206
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Taer1g05422 205 MobiDBLite consensus disorder prediction 1 45 - -
Taer1g05422 205 PANTHER VQ MOTIF-CONTAINING PROTEIN 11-LIKE 22 201 IPR039611 -
Taer1g05422 205 MobiDBLite consensus disorder prediction 59 91 - -
Taer1g05422 205 MobiDBLite consensus disorder prediction 8 30 - -
Taer1g05422 205 MobiDBLite consensus disorder prediction 59 86 - -
Taer1g05422 205 Pfam VQ motif 40 66 IPR008889 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Taer1g05422 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Taer Taer-Chr1:49663548 Taer6g00128 Taer-Chr6:900197 dispersed
Taer Taer-Chr1:49663548 Taer3g03006 Taer-Chr3:79652537 wgd