AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Taer1g05427 ATGTCACTGCTACTAACTTCTTTTCGTAGTCATTTCTTCAAACACCTGGCGTGCACTTCCTTCTCATCTCTTGGCACCACTGCAAATCTCACTCCTCGCTGCGTTTTTGGCTCCACCAGATACCACCCACCAACAAATTTTACACAATTCTTGAATTCGACCCCACTTATTGCAGCAGCATTTGCTACATCTTCTTCCTCTGAAACTCCGACCACTGGTTCATACCTATCTGTTGACATTCAAAGTCGTCAAGATGTCGCGGATATGCTTTCAGAAGCCCTGTTATGTTTTGGAGCTGTTTCAACAAGTGTGTTTGAACCAGATCCAGATAGCAGCAGCTCTAACAATGAGATATCGATTGTTTCGATATTCTCTGTATCTCATGATGTGCATCAAAGTATTGCATTGGCAGCTGATTCAATAGGCTTGAAAGAAACACCTGCTTATAAAGTCACTACAGGCTACCACTCTGACTGGATCGAAAATGCGCGGGAATCTTTCCATCCTATTGAAGTAACAGAAGGACTTTGGATTGTGCCTGAGTGGATAACTCCCCCGGACATCCAGGCAACAATTATTAATCTAAACCCGGGGCTCGCTTTTGGAACTGGCGACCACCCAACCACTAAACTATGTCTACTATTATTGCACAAGTTAATCAAAGGTGGTGAAACAGTTTTGGATTATGGCACAGGTTCAGGGATTCTTGCAATTGCAGCACTAAAGTTTGGTGCAGCCTTAGCTGTTGGGTTCGACATAGATCCTCAAGCCATTACAGCTGCACAGCATAATGCTGCTTTGAACAACATAGGCCCCGAGAAACTGGAACTACAGGTTGTTCCTAGGAACATTAGTTCTATGTCGACAGACCAATGGCAATGGGCTATGAAGAGTGATAGTGCTATAACAGAGCATGATGTGGAAGTCGTTGCTGAGAAAGAGAAGTACGACGTTGTGGTGGCAAATATTCTTTTGAACCCATTGCTAGATTTGGCAGATCATATTGTTTCTTATGCTAAACCTGGTGGTGTCATTGGTCTCTCTGGTATTATCTTGGAGCAGGTACCTAAGGTTGTGGAACGATACACGAATCTTTTGGAAGGGATTACGGTGTCACAAATTGATGACTGGGCTTGCATACATGGCACAAAGAAAAAGACTGGGTAG 1167 43.7 MSLLLTSFRSHFFKHLACTSFSSLGTTANLTPRCVFGSTRYHPPTNFTQFLNSTPLIAAAFATSSSSETPTTGSYLSVDIQSRQDVADMLSEALLCFGAVSTSVFEPDPDSSSSNNEISIVSIFSVSHDVHQSIALAADSIGLKETPAYKVTTGYHSDWIENARESFHPIEVTEGLWIVPEWITPPDIQATIINLNPGLAFGTGDHPTTKLCLLLLHKLIKGGETVLDYGTGSGILAIAALKFGAALAVGFDIDPQAITAAQHNAALNNIGPEKLELQVVPRNISSMSTDQWQWAMKSDSAITEHDVEVVAEKEKYDVVVANILLNPLLDLADHIVSYAKPGGVIGLSGIILEQVPKVVERYTNLLEGITVSQIDDWACIHGTKKKTG* 389
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Taer1g05427 388 Hamap Ribosomal protein L11 methyltransferase [prmA]. 71 384 IPR004498 GO:0006479(InterPro)|GO:0008276(InterPro)
Taer1g05427 388 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 146 381 IPR029063 -
Taer1g05427 388 PANTHER ELECTRON TRANSFER FLAVOPROTEIN BETA SUBUNIT LYSINE METHYLTRANSFERASE 75 385 IPR050078 GO:0005739(PANTHER)|GO:0008276(PANTHER)
Taer1g05427 388 CDD AdoMet-MTases 225 345 - -
Taer1g05427 388 Gene3D Vaccinia Virus protein VP39 166 388 IPR029063 -
Taer1g05427 388 Pfam Ribosomal protein L11 methyltransferase (PrmA) 75 385 - -
Taer1g05427 388 NCBIfam 50S ribosomal protein L11 methyltransferase 97 377 IPR004498 GO:0006479(InterPro)|GO:0008276(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Taer1g05427 K02687 ribosomal protein L11 methyltransferase [EC:2.1.1.-]