Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Taer1g05427 | ATGTCACTGCTACTAACTTCTTTTCGTAGTCATTTCTTCAAACACCTGGCGTGCACTTCCTTCTCATCTCTTGGCACCACTGCAAATCTCACTCCTCGCTGCGTTTTTGGCTCCACCAGATACCACCCACCAACAAATTTTACACAATTCTTGAATTCGACCCCACTTATTGCAGCAGCATTTGCTACATCTTCTTCCTCTGAAACTCCGACCACTGGTTCATACCTATCTGTTGACATTCAAAGTCGTCAAGATGTCGCGGATATGCTTTCAGAAGCCCTGTTATGTTTTGGAGCTGTTTCAACAAGTGTGTTTGAACCAGATCCAGATAGCAGCAGCTCTAACAATGAGATATCGATTGTTTCGATATTCTCTGTATCTCATGATGTGCATCAAAGTATTGCATTGGCAGCTGATTCAATAGGCTTGAAAGAAACACCTGCTTATAAAGTCACTACAGGCTACCACTCTGACTGGATCGAAAATGCGCGGGAATCTTTCCATCCTATTGAAGTAACAGAAGGACTTTGGATTGTGCCTGAGTGGATAACTCCCCCGGACATCCAGGCAACAATTATTAATCTAAACCCGGGGCTCGCTTTTGGAACTGGCGACCACCCAACCACTAAACTATGTCTACTATTATTGCACAAGTTAATCAAAGGTGGTGAAACAGTTTTGGATTATGGCACAGGTTCAGGGATTCTTGCAATTGCAGCACTAAAGTTTGGTGCAGCCTTAGCTGTTGGGTTCGACATAGATCCTCAAGCCATTACAGCTGCACAGCATAATGCTGCTTTGAACAACATAGGCCCCGAGAAACTGGAACTACAGGTTGTTCCTAGGAACATTAGTTCTATGTCGACAGACCAATGGCAATGGGCTATGAAGAGTGATAGTGCTATAACAGAGCATGATGTGGAAGTCGTTGCTGAGAAAGAGAAGTACGACGTTGTGGTGGCAAATATTCTTTTGAACCCATTGCTAGATTTGGCAGATCATATTGTTTCTTATGCTAAACCTGGTGGTGTCATTGGTCTCTCTGGTATTATCTTGGAGCAGGTACCTAAGGTTGTGGAACGATACACGAATCTTTTGGAAGGGATTACGGTGTCACAAATTGATGACTGGGCTTGCATACATGGCACAAAGAAAAAGACTGGGTAG | 1167 | 43.7 | MSLLLTSFRSHFFKHLACTSFSSLGTTANLTPRCVFGSTRYHPPTNFTQFLNSTPLIAAAFATSSSSETPTTGSYLSVDIQSRQDVADMLSEALLCFGAVSTSVFEPDPDSSSSNNEISIVSIFSVSHDVHQSIALAADSIGLKETPAYKVTTGYHSDWIENARESFHPIEVTEGLWIVPEWITPPDIQATIINLNPGLAFGTGDHPTTKLCLLLLHKLIKGGETVLDYGTGSGILAIAALKFGAALAVGFDIDPQAITAAQHNAALNNIGPEKLELQVVPRNISSMSTDQWQWAMKSDSAITEHDVEVVAEKEKYDVVVANILLNPLLDLADHIVSYAKPGGVIGLSGIILEQVPKVVERYTNLLEGITVSQIDDWACIHGTKKKTG* | 389 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Taer1g05427 | 388 | Hamap | Ribosomal protein L11 methyltransferase [prmA]. | 71 | 384 | IPR004498 | GO:0006479(InterPro)|GO:0008276(InterPro) | |
| Taer1g05427 | 388 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 146 | 381 | IPR029063 | - | |
| Taer1g05427 | 388 | PANTHER | ELECTRON TRANSFER FLAVOPROTEIN BETA SUBUNIT LYSINE METHYLTRANSFERASE | 75 | 385 | IPR050078 | GO:0005739(PANTHER)|GO:0008276(PANTHER) | |
| Taer1g05427 | 388 | CDD | AdoMet-MTases | 225 | 345 | - | - | |
| Taer1g05427 | 388 | Gene3D | Vaccinia Virus protein VP39 | 166 | 388 | IPR029063 | - | |
| Taer1g05427 | 388 | Pfam | Ribosomal protein L11 methyltransferase (PrmA) | 75 | 385 | - | - | |
| Taer1g05427 | 388 | NCBIfam | 50S ribosomal protein L11 methyltransferase | 97 | 377 | IPR004498 | GO:0006479(InterPro)|GO:0008276(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Taer1g05427 | K02687 | ribosomal protein L11 methyltransferase [EC:2.1.1.-] |