AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Taer1g05460 | ATGAATGAACAGACATGCTCACATACATACACACCTAAACACAATCACACGGTCGCATCTTTCCGCGTTTTACAAAAAACAGTAACCTTGAGCTTTGCTTTGAGATCGACATCCATGGCGGCTTCTACGGAACGTGAAAACTTCATCTACATCGCAAAACTCGCCGAGCAAGCCGAACGTTATGACGAGATGGTGGACGCCATGAAGAAAGTAGCAAAGTTGAATATCGAATTGACTGTTGAGGAGAGAAATTTGCTCTCAGTTGGATACAAGAACGTGGTGGGTTCACGTAGGGCATCATGGAGGATATTGTCTTCCATTCAGCAAAAAGAGGAGTCACGAGGCAATGAAGTGAATGTAAAGCGCATTAAGGAATATAGGCAGAAGGTGGAAACAGAGCTGACTGATATTTGCAATGATATCATGACCGTGATTGATGAGCATCTGATTCCATCTTCCTCTGCTGGAGAATCTACTGTTTTCTACTACAAGATGAAAGGGGACTATTATAGGTATCTTGCAGAGTTCAAGTCTGGTGATGACAAAAAAGAAGCAGCTGACTTGTCACTGAAGGCTTATCAATCGGCTTCTACTGCTGCGGAGGATTTGTCTCCTACTCATCCCATCCGATTGGGTTTGGCTTTGAACTTCTCAGTTTTCTATTATGAGATCATGAACTCTCCTGAAAGAGCTTGCCACCTGGCAAAACAAGCTTTTGATGAAGCAATCTCGGAACTTGACTCCTTGAGTGAGGAATCATACAAAGATAGCACTTTAATTATGCAACTCCTGAGGGACAACCTCACTTTGTGGACCTCTGACATTCCTGAGGATGGAGAAGACCAAAAGATGGAGATCACCAAATCTGGTGCAGATGATGCTGAGTAA | 888 | 43.36 | MNEQTCSHTYTPKHNHTVASFRVLQKTVTLSFALRSTSMAASTERENFIYIAKLAEQAERYDEMVDAMKKVAKLNIELTVEERNLLSVGYKNVVGSRRASWRILSSIQQKEESRGNEVNVKRIKEYRQKVETELTDICNDIMTVIDEHLIPSSSAGESTVFYYKMKGDYYRYLAEFKSGDDKKEAADLSLKAYQSASTAAEDLSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDSLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDQKMEITKSGADDAE* | 296 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Taer1g05460 | 295 | Coils | Coil | 51 | 84 | - | - | |
| Taer1g05460 | 295 | ProSitePatterns | 14-3-3 proteins signature 1. | 83 | 93 | IPR023409 | - | |
| Taer1g05460 | 295 | PRINTS | 14-3-3 protein zeta signature | 157 | 179 | IPR000308 | - | |
| Taer1g05460 | 295 | PRINTS | 14-3-3 protein zeta signature | 245 | 274 | IPR000308 | - | |
| Taer1g05460 | 295 | PRINTS | 14-3-3 protein zeta signature | 191 | 217 | IPR000308 | - | |
| Taer1g05460 | 295 | PRINTS | 14-3-3 protein zeta signature | 77 | 106 | IPR000308 | - | |
| Taer1g05460 | 295 | PRINTS | 14-3-3 protein zeta signature | 126 | 150 | IPR000308 | - | |
| Taer1g05460 | 295 | PRINTS | 14-3-3 protein zeta signature | 218 | 244 | IPR000308 | - | |
| Taer1g05460 | 295 | MobiDBLite | consensus disorder prediction | 276 | 295 | - | - | |
| Taer1g05460 | 295 | MobiDBLite | consensus disorder prediction | 275 | 295 | - | - | |
| Taer1g05460 | 295 | ProSitePatterns | 14-3-3 proteins signature 2. | 254 | 273 | IPR023409 | - | |
| Taer1g05460 | 295 | PIRSF | 14-3-3 | 39 | 284 | IPR000308 | - | |
| Taer1g05460 | 295 | FunFam | 14-3-3 protein epsilon | 39 | 285 | - | - | |
| Taer1g05460 | 295 | Gene3D | - | 25 | 287 | IPR036815 | - | |
| Taer1g05460 | 295 | SMART | 1433-4 | 45 | 285 | IPR023410 | - | |
| Taer1g05460 | 295 | SUPERFAMILY | 14-3-3 protein | 44 | 274 | IPR036815 | - | |
| Taer1g05460 | 295 | Coils | Coil | 232 | 252 | - | - | |
| Taer1g05460 | 295 | PANTHER | 14-3-3 PROTEIN | 44 | 277 | IPR000308 | GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER) | |
| Taer1g05460 | 295 | Pfam | 14-3-3 protein | 52 | 272 | IPR023410 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Taer1g05460 | K06630 | 14-3-3 protein epsilon |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Taer | Taer-Chr1:38802187 | Taer1g05460 | Taer-Chr1:49894654 | dispersed | |
| Taer | Taer-Chr1:49894654 | Taer5g03272 | Taer-Chr5:84319628 | dispersed | |
| Taer | Taer-Chr1:49894654 | Taer3g03043 | Taer-Chr3:79858588 | wgd | |
| Taer | Taer-Chr1:49894654 | Taer7g01493 | Taer-Chr7:9742300 | wgd |
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Taer1g01233 | WGDA | 2 | 259 | 14-3-3 family | AT1G78300 | 85.328 | 4.12e-166 | 458.0 | |
| Taer1g02158 | . | 3 | 258 | 14-3-3 family | AT1G78300 | 86.434 | 2.19e-163 | 451.0 | |
| Taer1g03795 | WGDA | 6 | 263 | 14-3-3 family | AT2G42590 | 75.676 | 9.87e-145 | 404.0 | |
| Taer1g05460 | . | 1 | 263 | 14-3-3 family | AT2G42590 | 76.046 | 1.96e-148 | 415.0 | |
| Taer2g01439 | . | 1 | 247 | 14-3-3 family | AT5G65430 | 85.375 | 1.80e-161 | 447.0 | |
| Taer2g01576 | . | 6 | 263 | 14-3-3 family | AT1G35160 | 85.714 | 4.24e-164 | 453.0 | |
| Taer2g01578 | . | 6 | 263 | 14-3-3 family | AT1G35160 | 85.714 | 4.24e-164 | 453.0 | |
| Taer2g02439 | ACH | 10 | 252 | 14-3-3 family | AT5G38480 | 88.066 | 1.52e-162 | 448.0 | |
| Taer3g03043 | . | 1 | 263 | 14-3-3 family | AT2G42590 | 76.806 | 6.74e-151 | 423.0 | |
| Taer5g03272 | . | 6 | 260 | 14-3-3 family | AT1G26480 | 82.745 | 8.17e-158 | 437.0 | |
| Taer7g01493 | . | 1 | 263 | 14-3-3 family | AT2G42590 | 76.046 | 1.66e-149 | 416.0 | |
| Taer8g02253 | . | 6 | 267 | 14-3-3 family | AT1G26480 | 83.206 | 6.01e-162 | 448.0 | |
| Taer9g02305 | . | 2 | 248 | 14-3-3 family | AT5G10450 | 85.425 | 1.61e-158 | 441.0 | |
| Taer9g02368 | . | 3 | 259 | 14-3-3 family | AT1G78300 | 85.992 | 1.59e-164 | 454.0 | |
| Taer10g01339 | ACH | 3 | 257 | 14-3-3 family | AT3G02520 | 88.235 | 7.36e-166 | 457.0 | |
| Taer11g00056 | WGDA | 1 | 266 | 14-3-3 family | AT1G35160 | 82.772 | 1.87e-160 | 447.0 | |
| Taer11g02539 | WGDA | 6 | 263 | 14-3-3 family | AT2G42590 | 76.062 | 1.05e-143 | 401.0 |