AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Taer1g05463 ATGGCTTCTTCTTCCCATTTCATTTGTTCATCTTCAGTGTTATTTTTACTTTGTTTTCAACTCTTTTCCTCCATTTCTGAAGCTGTCGTGCCTGCTTCGGACACATTCACTTACGTTAACGAAGGCGATTTTGGCGATTACATTGTCGAATACGACGCAAATTACCGTGCTCTTCCCCCTTTTAGCAACCCATTCCAGCTTTGTTTCTACAACACAACCCCTAACGCATTCACTCTAGCTCTTCGCATGGGTACGGTTCGATCCGAATCGCTCATGCGTTGGGTTTGGGAAGCTAACCGTGGGAACCCGGTTCGTGAAAACGCAACCGTCACATTCGGTACCGACGGAAACCTGGTCCTAGCAGACGCAGATGGTCGGGTTGTCTGGCAAACAAATACCGCCAACAAGGGCGTGGTTGGCTTTCAAGTGCTTCCCACTGGTAACATGGTTCTTCATGACGCTAAAGGTAAATACATATGGCAAAGCTTTGATTCACCAACGGATACTTTATTGGTAGGTCAGACATTCCGAGCTGGTGGACCGAATAAGCTCGTGAGCCGCCTTTCGGAGGTGAACAATATCGATGGACCATATAGTTTTGTGATGGAACCAAAAGGGTTATCCATGTACTACAAAAGTCCGAACTCGGCTCGACCAATGCTTTACTGGTCGTCTAGCGAATGGTTCACCATTGACAAAGGGAGTTTGAGCAACCTAACTGTTACTTCCATCCCGGACACTGATGAGGGGTTTCTTTATTACTTGACGTTTGAGTATTTTACCACAAACCCGACAGCATCTTCAAACCGTAACATAGCGTATACAAAATACAACAACACGTTATCGTATCTCCGATTAGGGATAGACGGAAACCTTAGAGTCTACACGTATAACCCGAATGTGCAAGGGGTGGCGTGGGAGTTGGTTTACACGTTTCTTGATCGCGATTCTATGGAAGGTGAGTGTCAGTTACCGGGACGTTGTGGGAAGTTTGGATTATGTGAGGATAGCCAGTGTGTGGCGTGCCCGACACCGAGTGGGCTAAGTGGTTGGAGTAAAGATTGTGATGTGAAGAAGGTGACGTCTTGCAAAAGTAGCGAGTTTGGGTACTATAAGCTTGAAGGGGTTGATCATTTTATGATCAAGTACACGAGGGGTGACGGGCCGACGAAACAGAGCGATTGCGAGAGCAAATGCACAAAGGATTGTAAGTGTATGGGGTATTTCTATCACACTGATCGTTCGAGGTGTTGGATTGCTTATGATTTAAAAACACTAACACGAGTTGGGAACTCGACTCATTTGGCCTACATCAAAGCACCCAACAAGTAG 1332 46.17 MASSSHFICSSSVLFLLCFQLFSSISEAVVPASDTFTYVNEGDFGDYIVEYDANYRALPPFSNPFQLCFYNTTPNAFTLALRMGTVRSESLMRWVWEANRGNPVRENATVTFGTDGNLVLADADGRVVWQTNTANKGVVGFQVLPTGNMVLHDAKGKYIWQSFDSPTDTLLVGQTFRAGGPNKLVSRLSEVNNIDGPYSFVMEPKGLSMYYKSPNSARPMLYWSSSEWFTIDKGSLSNLTVTSIPDTDEGFLYYLTFEYFTTNPTASSNRNIAYTKYNNTLSYLRLGIDGNLRVYTYNPNVQGVAWELVYTFLDRDSMEGECQLPGRCGKFGLCEDSQCVACPTPSGLSGWSKDCDVKKVTSCKSSEFGYYKLEGVDHFMIKYTRGDGPTKQSDCESKCTKDCKCMGYFYHTDRSRCWIAYDLKTLTRVGNSTHLAYIKAPNK* 444
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Taer1g05463 443 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE-THREONINE-PROTEIN KINASE SD2-5 57 440 IPR051343 -
Taer1g05463 443 Gene3D - 43 164 IPR036426 -
Taer1g05463 443 ProSiteProfiles Bulb-type lectin domain profile. 33 164 IPR001480 -
Taer1g05463 443 Pfam D-mannose binding lectin 95 177 IPR001480 -
Taer1g05463 443 PIRSF SLG 4 443 IPR035446 -
Taer1g05463 443 SMART blect-4 49 166 IPR001480 -
Taer1g05463 443 FunFam Os04g0303100 protein 85 219 - -
Taer1g05463 443 CDD PAN-AP-plant 362 439 - -
Taer1g05463 443 CDD B-lectin 49 166 IPR001480 -
Taer1g05463 443 Pfam S-locus glycoprotein domain 234 347 IPR000858 GO:0048544(InterPro)
Taer1g05463 443 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 211 IPR036426 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Taer1g05463 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Taer Taer-Chr1:49936877 Taer1g05465 Taer-Chr1:49943865 dispersed
Taer Taer-Chr1:49936877 Taer1g05464 Taer-Chr1:49941474 tandem