Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Taer1g05464 | ATGCCTTTTTCCTCCAACTTCATTCGTTCATCTTCCATACTAATTTTTCTATGTTTTCAACTCTTTTCCTCCATTTCTGAAGCTGTTGTGCCAGCTTCAGAAACATTCACTTACGTAAACCAAGGTGAATTTGGCGATTACATCGTCGAGTACAATGCAAATTATCGTTTTCTTGAACCTTTTAGCAGCCCATTCCAACTTTGTTTCTATAACACCACCCCTAACGCATTCACTCTAGCTCTCCGTATGGGTACCGTTCGATCCGAATCCCTCATGCGTTGGGTTTGGGAAGCTAACCGTGGAAACCCGGTTCGAGAAAACGCCACCCTCACATTCGGTACTGACGGAAACCTGGTCCTAGCAGATGCGGATGGTCGGGTTGTTTGGCAAACGAATACCGCCAACAAGGGCGTGGTTGGTTTTCAAGTGCTTCCCACTGGTAACATGGTTCTTCATGACGGTAAAGGTAATTTCTTATGGCAAAGCTTTGATTCACCAACGGACACTTTGTTGGTGGGTCAAACACTACGAGCTGGTGGTCAGAATAAACTTGTGAGCCGCCTTTCGGAGGCGAACAATGTCGACGGACCGTATAGTTTGGTGATGGAGCCAAAAGGGTTATCCATGTATTACAAAAGTCCGAACTCGCCTCGACCAATGCTTTACTGGTCATCTAGCGAATGGTTCACTGTTGACAAGGGTAGTTTGATCAATCTAACTCTTACGTCGAACCCCGACACGGATGAGGGGTTTCGTTATTACTTGACGTTCGATTACTTCAGCACAGACCCAACATCATCTGGGAGCCGCAACATGGCATTATCGCGGTACAACAACACATTATCGTATCTTCGATTAGGGATAGACGGAAACCTTAGATTCTACACGTATAACCCAAATATTCAAGCGGGGGCATGGGACGAGGTGTACACGTTTCTTGATCGGGATTCAAGGGAAGGCGAGTGTCAGTTACCGGGGCGATGTGGGAAGTTTGGGCTATGTGAGGATAGCCAGTGTGTGGCGTGCCCGACACCGAGTGGGCTAAGTGGTTGGAGCAAAGATTGTGATGTGAAGAAGGTGACGTCTTGCAAAAGTAGCGAGTTTGGGTACTACAAGCTTGAAGGTGTTGATCATTTTATGATCAAGTACACGAGGGGTGACGGGCCGACGAAACAGAGCGATTGCGAGAGCAAATGCACCAAGGATTGTAAGTGTATGGGGTACTTCTATCACACTGATCGTTCCAGGTGTTGGATTGCTTACGATTTGAAAACACTAACACGTGTTGGTAACTCGACTCATTTGGCGTATATCAAAACACCCAACAAGTAG | 1332 | 46.62 | MPFSSNFIRSSSILIFLCFQLFSSISEAVVPASETFTYVNQGEFGDYIVEYNANYRFLEPFSSPFQLCFYNTTPNAFTLALRMGTVRSESLMRWVWEANRGNPVRENATLTFGTDGNLVLADADGRVVWQTNTANKGVVGFQVLPTGNMVLHDGKGNFLWQSFDSPTDTLLVGQTLRAGGQNKLVSRLSEANNVDGPYSLVMEPKGLSMYYKSPNSPRPMLYWSSSEWFTVDKGSLINLTLTSNPDTDEGFRYYLTFDYFSTDPTSSGSRNMALSRYNNTLSYLRLGIDGNLRFYTYNPNIQAGAWDEVYTFLDRDSREGECQLPGRCGKFGLCEDSQCVACPTPSGLSGWSKDCDVKKVTSCKSSEFGYYKLEGVDHFMIKYTRGDGPTKQSDCESKCTKDCKCMGYFYHTDRSRCWIAYDLKTLTRVGNSTHLAYIKTPNK* | 444 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Taer1g05464 | 443 | CDD | PAN-AP-plant | 362 | 441 | - | - | |
| Taer1g05464 | 443 | PIRSF | SLG | 5 | 443 | IPR035446 | - | |
| Taer1g05464 | 443 | SMART | blect-4 | 49 | 166 | IPR001480 | - | |
| Taer1g05464 | 443 | PANTHER | G-TYPE LECTIN S-RECEPTOR-LIKE SERINE-THREONINE-PROTEIN KINASE SD2-5 | 52 | 441 | IPR051343 | - | |
| Taer1g05464 | 443 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 74 | 224 | IPR036426 | - | |
| Taer1g05464 | 443 | Pfam | D-mannose binding lectin | 95 | 181 | IPR001480 | - | |
| Taer1g05464 | 443 | CDD | B-lectin | 49 | 166 | IPR001480 | - | |
| Taer1g05464 | 443 | ProSiteProfiles | Bulb-type lectin domain profile. | 33 | 164 | IPR001480 | - | |
| Taer1g05464 | 443 | Gene3D | - | 31 | 165 | IPR036426 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Taer1g05464 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Taer | Taer-Chr1:49941474 | Taer1g05492 | Taer-Chr1:50143984 | dispersed | |
| Taer | Taer-Chr1:49936877 | Taer1g05464 | Taer-Chr1:49941474 | tandem | |
| Taer | Taer-Chr1:49941474 | Taer1g05465 | Taer-Chr1:49943865 | tandem |