AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Taer1g05522 ATGGGGAATAAGTTGGGGAGAAGAAGACAATTAGTTGATGAAAAGTATACAAGGCCTCAAGGGTTGTATCAACATAAAGATGTAGATCATAAGAAGCTTCGTAAGCTTATACTTGATTCTAAACTTGCACCTTGTTACCCTGGAGATGATGATTGCACTTGTGATCTTGAAGAGTGTCCAATTTGCTTCTTGTATTATCCAAGTCTGAATAGATCAAGATGTTGTACCAAAGGCATTTGTACTGAGTGTTTTTTGCAGATGAAGACACCTAATTCTACACGTCCTACACAATGTCCGTTTTGTAAAACTTTAAACTATGCTGTGGAGTATAGAGGTGTGAAAACTAAAGAGGAAAAGGGGCAGGAGCAAATTGAAGAACAAAGAGTGATTGAAGCGAAAATTAGAATGAGACAACAAGAAATTCAAGATGAAGAGGAACGAATGCTGAAAAGGCAAGAAACGGGCTTTTCAAACAGGTTGCTTGAATCAAGTGAGGCTGAATATTTCTCCCCAGCAGCAACATCCTCTTCTGAAGGTGAGGAAATAGTTTCTGTTCCAAATCCTGCAACATTTAGACATCCTCCCCGCAATAGGGAAATAAGAGATGACGAGTTTGATCTTGATCCTGAAAACATAATGCTCATGGAAGCCATTTGGTTGTCATATCAGGAGGATAACAAGCACAAACATGTTAATCCTAATTACGGTGATGCCACCCAGCTAGCAAAATACGCAACAGAAGTACGTCTTTTAGCATCCATGGCCCCACAAGCAGGGTATTCACCATCATCCTCGTCACCTTCTGGTGGACTTGCATGCGCCATAGCCTCCCTCGCTGAACGCCAACAAGCAGGGGGTGAATCATCAACTAATTACAACACTTATGGTGGGAATTTATCAACATACAACGTGCATCCCAACCATAGTCAAACAGGGTTATTATCACTTGATAGTCATTTGCAAATTAATGATGATAACTCGGAAGAAATAGGAGGAACAAGATATGGGTATGATGGAAATAATGATGTAAGCAGAGGGCAGTATGGTGAATTTGATGAGGCGGAAGATAGTGGTGGTGGGAATATAGTTCCTGAGAGCTTTGAAGAGCAGATGATGTTAGCCATGGCGGTTTCATTGGCAGAGGCTCGAGCTAGGACTAGTAGCAGTACACCGGAGGCTGCTTGGATTTAG 1191 41.56 MGNKLGRRRQLVDEKYTRPQGLYQHKDVDHKKLRKLILDSKLAPCYPGDDDCTCDLEECPICFLYYPSLNRSRCCTKGICTECFLQMKTPNSTRPTQCPFCKTLNYAVEYRGVKTKEEKGQEQIEEQRVIEAKIRMRQQEIQDEEERMLKRQETGFSNRLLESSEAEYFSPAATSSSEGEEIVSVPNPATFRHPPRNREIRDDEFDLDPENIMLMEAIWLSYQEDNKHKHVNPNYGDATQLAKYATEVRLLASMAPQAGYSPSSSSPSGGLACAIASLAERQQAGGESSTNYNTYGGNLSTYNVHPNHSQTGLLSLDSHLQINDDNSEEIGGTRYGYDGNNDVSRGQYGEFDEAEDSGGGNIVPESFEEQMMLAMAVSLAEARARTSSSTPEAAWI* 397
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Taer1g05522 396 ProSiteProfiles Zinc finger RING-type profile. 59 102 IPR001841 -
Taer1g05522 396 MobiDBLite consensus disorder prediction 168 201 - -
Taer1g05522 396 PANTHER PROTEIN SIP5 1 321 IPR039301 GO:0005737(PANTHER)
Taer1g05522 396 MobiDBLite consensus disorder prediction 168 183 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Taer1g05522 - -