AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Taer1g05579 ATGCAGCAGACGGAATCGCCCATAAAATCTGGCACTAATGTTCAACCTTCAAAGGTTTATGCAAATGGTAAACCAGTGAATTTGGGTACCAATGGTCAGCCCATTACATTAGGAAGCAAAGGTCAACAAATCACCATGGTTCCCATTAGTGAGGCGGTGAATAATAATAAATATCTGACGAAAAAAAGATCAGGGACAGTGAATGGATCGATACAAATTGTTAATGGAACAAGTATTGTTAAGAGAGAAATCACACCACCACTAGTTAAGTCTTCTGTGAAAGTTAAAGAACCTACTGGTTTCCCGCCGGAAGAATATAGGGTCTTGCCATCTGATGAAAGTTTCAAATGGGCAAATGAAAATTATAATTCAGTACAAAGATCAATAGACGTGTGGTCTTTTGTTCTGTCTTTGCGTGTTCGTGTTCTACTTGACCATGCAAAGTGGGCATATTTTGGTTCCTTCACAAAAGAAAAACAGAAAAACAGAAGAAGAAAAACAGCTTCATGGATAAAAGAACGGCTGCTTCAACTTGGGCCGACATTTATAAAACTTGGCCAGTTAGTCTCAACAAGATCAGATTTATTTCCACATGAATTTGTCGATGAACTTGCCAAATTACAGGACAGAGTACCAGCCTTCTCATCAGCAAAAGCAAAAGATTTTATTGAGAAGGAATTAGGAGCTCCAGTTGATGTACTCTTCAGGGAATTTGAAGAACGGCCTCTTGCAGCTGCTAGTCTTGGTCAGGTACATCGTGCGATATTACATAATGGAGAGAAAGTAATCGTTAAAGTTCAAAGACCTGGTTTGAAGAAACTTTTTGACATCGATTTACGAAATATAAAGCTAGTTGCAGAGTATTTTCAAAGAAGTGAAACTCTTGGTGGCCCTACTAAGGATTGGATAGGTATCTATGATGAATGTGAAAAGATCTTGTACCAGGAGATTGATTATATAAATGAAGGGAAAAATGCGGATAGATTTCGTCGAGATTTTCGTAATATAAAGTGGGTGCGAGTGCCTCAAGTATTCTGGGATTATACTGCAACCAAGGTGCTGACATTGGAGTATGTTCCAGGCATTAAAATCAACAATTTAGATGCGATAAAACAAAGAGGTTACTGTCGATCGCGAATCTCTGCACATGCCACTGAATCATACCTGATTCAGATACTGAAAACTGGTTTCTTTCACGCCGATCCTCATCCTGGAAATCTTGCTATTGATGTCGATGAATCATTAATCTATTATGATTTTGGTATGATGGGGGAGATTAAGTCACTCACAAGAGAAAAATTGATGGATCTTTTTTATGCAATCTATGAAAAGGATGCAAAAAAGGTTATGAACAGTTTGATAAAACTTGAAGCGCTACAACCTACCGGAGACATGTCATCAGTGAGAAGATCTATTCAGTTTTTTTTGGATAATTCGTTAGATCAGTCAGCAGATCAGGAACAAACTTTGGCTGCAATAGGCGAGGACTTGTTTTCTATAGCAACTGATCAACCTTTCCGGTTCCCTTCCACCTTCGCTTTTGTAATTAGGGCGTTTTCCACTCTTGAAGGAGTTGGCTACTCACTGGATCCAAAATTTTCATTTGTTAAAATTGCTGCACCTTATGTACAGGAGCTGTTAGATATCAAACAACAGCAGCCCAGTGGAACACAACTTGTTGCGGAAATGCAAAAACAAGCTGATGATGCAAGATCAAACACCATGTCAATGCCTTACAGAGTTCAACGGATTGAAGAGTTTGTTAAACAAGTAGAAGTAGGAGACCTTAAACTTCGTGTCAGAGTCCTCGAGTCTGAGAGAGCAGCTCGGAAGGCAACAATATTGCAAATGGCAACCCTGCACACAGTTATTGCTAGTACGCTAGTAAATATCGGTGTCACAGTTAGCATACAAGGCAGCCGACATATAGCAAGGAGTTCATTTATTGTAGCAGGTATTTTCATAATACTGCTCATGAGGTCCATGCAAAGGGTGAAGAATCTTGATAAAATTGAAAAGATGATTTAG 2028 39.05 MQQTESPIKSGTNVQPSKVYANGKPVNLGTNGQPITLGSKGQQITMVPISEAVNNNKYLTKKRSGTVNGSIQIVNGTSIVKREITPPLVKSSVKVKEPTGFPPEEYRVLPSDESFKWANENYNSVQRSIDVWSFVLSLRVRVLLDHAKWAYFGSFTKEKQKNRRRKTASWIKERLLQLGPTFIKLGQLVSTRSDLFPHEFVDELAKLQDRVPAFSSAKAKDFIEKELGAPVDVLFREFEERPLAAASLGQVHRAILHNGEKVIVKVQRPGLKKLFDIDLRNIKLVAEYFQRSETLGGPTKDWIGIYDECEKILYQEIDYINEGKNADRFRRDFRNIKWVRVPQVFWDYTATKVLTLEYVPGIKINNLDAIKQRGYCRSRISAHATESYLIQILKTGFFHADPHPGNLAIDVDESLIYYDFGMMGEIKSLTREKLMDLFYAIYEKDAKKVMNSLIKLEALQPTGDMSSVRRSIQFFLDNSLDQSADQEQTLAAIGEDLFSIATDQPFRFPSTFAFVIRAFSTLEGVGYSLDPKFSFVKIAAPYVQELLDIKQQQPSGTQLVAEMQKQADDARSNTMSMPYRVQRIEEFVKQVEVGDLKLRVRVLESERAARKATILQMATLHTVIASTLVNIGVTVSIQGSRHIARSSFIVAGIFIILLMRSMQRVKNLDKIEKMI* 676
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Taer1g05579 675 MobiDBLite consensus disorder prediction 1 26 - -
Taer1g05579 675 PANTHER CHAPERONE-ACTIVITY OF BC1 COMPLEX CABC1 -RELATED 93 621 IPR050154 GO:0046467(PANTHER)|GO:0055072(PANTHER)|GO:1901031(PANTHER)
Taer1g05579 675 Pfam ABC1 atypical kinase-like domain 206 452 IPR004147 -
Taer1g05579 675 CDD ABC1-ADCK3-like 206 453 - -
Taer1g05579 675 SUPERFAMILY Protein kinase-like (PK-like) 208 456 IPR011009 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Taer1g05579 K03688 ubiquinone biosynthesis protein
Taer1g05579 K08869 aarF domain-containing kinase
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Taer Taer-Chr1:50864273 Taer6g02637 Taer-Chr6:19698189 dispersed
Taer Taer-Chr1:41136149 Taer1g05579 Taer-Chr1:50864273 transposed
Taer Taer-Chr1:50864273 Taer5g01504 Taer-Chr5:15387655 wgd