Gene detail

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Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Taer1g05593	ATGATACGATTAGCGTTTGGGCCGGATAATTTAATACATGGTTTAATCAATGATGCCAAATCCCACCTTAAACTGCCTTCAAACACAACTGTTGGTCAACCTGATATGCCAATTGGCCCAATTCAATTCACTCCATTCTCACCTTCAACCCGTCATTCACCATTGACGATCCAAGTTCCGACCCGTTGTTGTGATAACCATGGTCAACCCATTGACTTTGCTCCAATGGTTTACCCGGCTTCATATCCTGAAGATTATCACCTTCACAACCACCTTCGTTTCATGTCTTTAGAAGATCAAATAGAGCCTGTTAACAGCCCGGATTTTTCGTCTTGTCATTACGAGCCTGCATTGGGTCCTCGGGCCAATAGGAGGTCGCCTAGTTTACCTGAATTTCCTTTCAAAGTTTGTCATTACTTCATTAAAGGCTTTTGTAGACATGGAAATAATTGTAGGTATTTACACCCTACTCCTGAAAGCTTTTCACAAATCTTTAACTCTAGATTAAGCGATGATGATAACGTCTTTTCACCCATGTCTCTTGAGAAACTAGAGTTAGAACTCACTGAGTTACTTAAATCTAGAAGAGGGTTTCCTGTTTCCATAGCTTCTTTGCCCATGATTTATTATGAAAAATTCGGTAAAACACTTCAAGCTGAAGGATACTTGACCGAAAGTCAACGACATGGGAAAGCCGGCTATAGTTTGACCAAACTTCTGGCCCGCCTTAAAAGCATTTGTCTCATTGATAGGCCACATGGGCAGCATGCGGTTGTGCTTGCCGATGACATGGCAAAATTCATGGATCATATTGGAGATAGAAATGAACATGGTGGAATTGTGGCGGGTTCTAGACAGATATACTTGACTTTTCCAGCTGAAAGTACCTTTTCTGAGGTTGATGTTTACAATTATTTCAACAAATTTGGTCCGGTCCGTGATGTGAGAATTCCATGTCAACAAAAGAGAATGTTTGGATTTGTGACTTTTGTGTTTGCGGATACCGTTAGGCATATTTTAAACAAGGGAAATCCTCATTTTGTTAGTGGTGCACGTGTTTTGGTCAAACCGTATCGTGAAAAATGCAAGATTGATGATAGGAAACATGGTTACGCATATCAACATCATATGTACCAAGGTTCTCAATGTCTTGATACCGAACTCGGGCTGCAGTCAAGCAATGCTCATGCTCAACAAACGAACTTCGATTCGACAGAGCCTTTTAACTATTTTCTTGATGTATTAAACAACGGGGCAGCCAGTGAACAAAAGATTAGGCAGATTAATACTGAATACAACGAGCAAGAAAGTAGCCAGGGACTGAATCTTCCGGACAGTCCGTTTGCATCTGGATTAGGAGGTGAAATATCAACAACAACAGTTATATAG	1389	40.75	MIRLAFGPDNLIHGLINDAKSHLKLPSNTTVGQPDMPIGPIQFTPFSPSTRHSPLTIQVPTRCCDNHGQPIDFAPMVYPASYPEDYHLHNHLRFMSLEDQIEPVNSPDFSSCHYEPALGPRANRRSPSLPEFPFKVCHYFIKGFCRHGNNCRYLHPTPESFSQIFNSRLSDDDNVFSPMSLEKLELELTELLKSRRGFPVSIASLPMIYYEKFGKTLQAEGYLTESQRHGKAGYSLTKLLARLKSICLIDRPHGQHAVVLADDMAKFMDHIGDRNEHGGIVAGSRQIYLTFPAESTFSEVDVYNYFNKFGPVRDVRIPCQQKRMFGFVTFVFADTVRHILNKGNPHFVSGARVLVKPYREKCKIDDRKHGYAYQHHMYQGSQCLDTELGLQSSNAHAQQTNFDSTEPFNYFLDVLNNGAASEQKIRQINTEYNEQESSQGLNLPDSPFASGLGGEISTTTVI*	463

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Taer1g05593	462	Gene3D	-	131	213	-	-
	Taer1g05593	462	MobiDBLite	consensus disorder prediction	433	462	-	-
	Taer1g05593	462	SUPERFAMILY	RNA-binding domain, RBD	297	376	IPR035979	GO:0003676(InterPro)
	Taer1g05593	462	Pfam	RNA recognition motif	298	344	IPR000504	GO:0003723(InterPro)
	Taer1g05593	462	Gene3D	-	291	367	IPR012677	-
	Taer1g05593	462	ProSiteProfiles	Zinc finger C3H1-type profile.	131	158	IPR000571	GO:0046872(InterPro)
	Taer1g05593	462	SMART	rrm1-1	286	356	IPR000504	GO:0003723(InterPro)
	Taer1g05593	462	ProSiteProfiles	Eukaryotic RNA Recognition Motif (RRM) profile.	285	360	IPR000504	GO:0003723(InterPro)
	Taer1g05593	462	FunFam	zinc finger CCCH domain-containing protein 53-like isoform X2	292	363	-	-
	Taer1g05593	462	PANTHER	RNA-BINDING (RRM-RBD-RNP MOTIFS)	1	393	-	-
	Taer1g05593	462	SUPERFAMILY	CCCH zinc finger	134	156	IPR036855	GO:0046872(InterPro)
	Taer1g05593	462	ProSiteProfiles	OST-type HTH domain profile.	180	263	IPR025605	-
	Taer1g05593	462	SMART	c3hfinal6	133	157	IPR000571	GO:0046872(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Taer1g05593	-	-

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Taer	Taer-Chr1:23480918	Taer1g05593	Taer-Chr1:50953324	dispersed
	Taer	Taer-Chr1:50953324	Taer3g00536	Taer-Chr3:5575391	dispersed
	Taer	Taer-Chr1:50953324	Taer7g01552	Taer-Chr7:10157895	wgd