AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Taer1g05622 ATGGGTCAAGCAAGCAAGCAAGCAAGCCTATATGTTACGGTGGACATGATTCGTCACTTCATTGCAATATCATCATCAAGTATCTTCAGCAAGGGTTGTAGCGTGGTTTACATGAAGAGATGCGACAGTACTCGACACTTTTATCCTTTAACCAGTGTTCAGATAGGGGATTTGCAGTCTTATCTTTCGGATCTTAGCCTTTTTTTGGCGCCTGATAGCAATGCGTTTTATGTGTTAGTGGATAATAGGCCATGGTTGGAAGATCTGCCCTCGCGCCCTGCGCACTTATGGCAGTTAATGGTTACCAAGTCAAGGATGTCCCCTTTTGCGAATACAAGAGGACGAAAGGGGAAGAAAGATACTGGAGAGTTTATTGAACAGAAAGTCAGATCTAAATCTTCAGACCACTCACAAAACTTGAAAAAATGGTTCTCGGTGGTTAATGCTGCAACGTTATCAAGAAAGAGGGCTTTGCTACCTGTTAAGAAGCTTAGGACTTCGTTGCTTGCAAATAGCAAATTGCATAGAACCTTGTTTGGATTTATCGTGTTTCAAGTGGTGTGGAAAGATGTTCGTGGTATCAATTACTTGAATGAGCTTCAGACTGATACATCTCTTGCTATAGAGGCTAAATACATGAAAAGATGGGAATTTGATAGCATAAATCAAGCAGCCAGATGCATACATACATGGTTTCCGGGGACATTGCGTGAACGGTATCTATTGCAAGAGCATCTTGACTCCATGATAGGAGATGAATTCCATGATGCTTCCAGTGAATTTCCCGATAGCCACAGTACAAATAGTAATGAAAAAACATCGACTGTCAGTACAAGTGAGCCCGATGGATCTCCCTGCACTCCTCGTTGCAATCTTGGTGAAAAAATGGAAACTTCATTAGATCAAGCAAGCATACTACATACGCCCCCTCCCAAGGGACCATATAAAAGAAGGAAACTAATGTCTCCGACAGGAATAGATATTAATACCAGTTTCTATGCAGAAATAACTCATGGTGAAGCAGTTTGCACACCAAGGGTCTCATCTGATGCAAACGATTTTGTAGAATCAACTGAACCTATGGAGTACAAGGATGTTCTTCTTTTGTTTCGGTTCAATGATCATGACCTCCCTTTTGAATTACAGAAGATAATATTATCTGATCTACGATTATTGACTCTTTTAGAAGCTGGACTTCCATCCTGGGTAATTTTTTGTCAGTCTTATCCCGGGTTTTGTCATGTTTATCGCCCATGGATGTGCCCTTTAGCCCGGGCTCTATATGTAGTAATTTCCATTGCTACGGTTGTTATTGGTTTCTATGATCTGTACAAAAACGTCCCTGTGCTTAAGGCTACTGCTTCTCGTTTATGCGGGCCTCTTTTTGATTGGATAGAAACATGGGAGATGGTATCAAGAATCAAGTACTTGGGTACCATGTTGTTTTTGCACAATTCTGAGAAGGCGGTTATGTGGTTTTTGACGATGACACGTACCATTCGGTCGTTTGTTTCGGTTATCACACAGCCATTAGGGGGGCCATTTTCTGATTTTCTCGAGGTTGTGCTACCTCTTTGGAATTTATTGATCCAAACAGGCCAGTATTTGTGCTCATTTGTTTGGGTTTTGATGGAAAGTTCTTGGGATGTATTGGAGAATCTAATTGAAGTCATACTGATACCCGTGTGGTTCATTTCTACAGTTATTTGGACTATTGTAATGACTGTTATGTACCCAATATTCTGGTGCATTTGGGGGATACTATACACTCCAGTCAGTCTCATTCTCGGTCTATCAAATTTTGTGGGATTTCTTTATAACCAAATATACGATTTAGCTCAAGACATATGGCTGTTTGCGAGTGGGGTCTTCAAGTTTGCATCAAGCGCCGAGTCAGCAGTCAACACATATGAGGTTTCTATTTGGCGGTCTCTCTGGAATGACCTCTTTTCCCAGGTTTTTCGTGCCGTCCGGAGTATTTTAAACGGATTTGTGGCATTTTTTACAGCTTGCAACAGACATCGGTTAAGCATATATAATCATTTACAGGAGCTCATTAGAACACTTAATCAACCAACCCACAGGCCAATGCCTTTGAATTCTAGCCATACATCACAGGGATCTAGAAATAAAATGCGGGCAGAGGGCAGGGAAAGAAAGGCGCCACCAAGGAGAAACTTGAAAGAGAGTTGA 2193 41.45 MGQASKQASLYVTVDMIRHFIAISSSSIFSKGCSVVYMKRCDSTRHFYPLTSVQIGDLQSYLSDLSLFLAPDSNAFYVLVDNRPWLEDLPSRPAHLWQLMVTKSRMSPFANTRGRKGKKDTGEFIEQKVRSKSSDHSQNLKKWFSVVNAATLSRKRALLPVKKLRTSLLANSKLHRTLFGFIVFQVVWKDVRGINYLNELQTDTSLAIEAKYMKRWEFDSINQAARCIHTWFPGTLRERYLLQEHLDSMIGDEFHDASSEFPDSHSTNSNEKTSTVSTSEPDGSPCTPRCNLGEKMETSLDQASILHTPPPKGPYKRRKLMSPTGIDINTSFYAEITHGEAVCTPRVSSDANDFVESTEPMEYKDVLLLFRFNDHDLPFELQKIILSDLRLLTLLEAGLPSWVIFCQSYPGFCHVYRPWMCPLARALYVVISIATVVIGFYDLYKNVPVLKATASRLCGPLFDWIETWEMVSRIKYLGTMLFLHNSEKAVMWFLTMTRTIRSFVSVITQPLGGPFSDFLEVVLPLWNLLIQTGQYLCSFVWVLMESSWDVLENLIEVILIPVWFISTVIWTIVMTVMYPIFWCIWGILYTPVSLILGLSNFVGFLYNQIYDLAQDIWLFASGVFKFASSAESAVNTYEVSIWRSLWNDLFSQVFRAVRSILNGFVAFFTACNRHRLSIYNHLQELIRTLNQPTHRPMPLNSSHTSQGSRNKMRAEGRERKAPPRRNLKES* 731
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Taer1g05622 730 MobiDBLite consensus disorder prediction 692 730 - -
Taer1g05622 730 MobiDBLite consensus disorder prediction 261 285 - -
Taer1g05622 730 MobiDBLite consensus disorder prediction 692 709 - -
Taer1g05622 730 MobiDBLite consensus disorder prediction 300 319 - -
Taer1g05622 730 MobiDBLite consensus disorder prediction 710 730 - -
Taer1g05622 730 PANTHER OS05G0597400 PROTEIN 38 722 - -
Taer1g05622 730 MobiDBLite consensus disorder prediction 257 292 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Taer1g05622 - -
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Taer Taer-Chr1:51170078 Taer7g01567 Taer-Chr7:10246280 dispersed
Taer Taer-Chr1:51170078 Taer5g01770 Taer-Chr5:53528880 transposed