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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Taer1g05643 ATGATTTACCTCTTTTTCGCTGTTTTATTCGTCGAAATGTTAACGATTCTATTACTTCTGTTCAAAACTCCTTTCCGAAAGCTTTTGATCATCGGATTAGATCGTGCTAAACGTGGAAGAGCTCCGTTGGTTGTCAAATCCGTCGGCGCTACTGTGTTCGTCATCATGATGTACAACGTTTACAGCGTTACGGAAATACAGAGCCGGCCGGTTGACGTTGTTAATCCTACTGATCAGATCCTACTTGCTTATCACATGCTCGAAGCTTCTCTTATGGGATTCTCTCTTTTCCTATCACTAATGATAGATAGGCTACATCATTACATAAGAGAACTTCGAATACTTAGAAAAACCATGGAAACTACGAAGAAACAAAACCGAGCAGCAGAAGAAACCAAGAACAAAGGTGCAGATGAGGTTAAAATTCTAAATGATGAATTATCTAAATTGAAAACACGAATTAAAGAACTGGAATCTGAACATGAAGCAAAGGTAAAAGAGATCAAATCTGCTGAAGCTAATTCAGTTGCTCTCAAGAACCAATCAGAAGGTTTTCTTCTCGAATATGACCGTTTGTTAGCTGAAAATCAAGCTCTTAGAGATCAATTGCGTGACATTGATGAGAGTGTGTCTCACGTTACTGGAAAGAAAAATATGTGA 660 38.33 MIYLFFAVLFVEMLTILLLLFKTPFRKLLIIGLDRAKRGRAPLVVKSVGATVFVIMMYNVYSVTEIQSRPVDVVNPTDQILLAYHMLEASLMGFSLFLSLMIDRLHHYIRELRILRKTMETTKKQNRAAEETKNKGADEVKILNDELSKLKTRIKELESEHEAKVKEIKSAEANSVALKNQSEGFLLEYDRLLAENQALRDQLRDIDESVSHVTGKKNM* 220
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Taer1g05643 219 Gene3D - 136 199 - -
Taer1g05643 219 PANTHER BCR-ASSOCIATED PROTEIN, BAP 1 200 IPR008417 GO:0005783(InterPro)|GO:0005789(PANTHER)|GO:0006886(InterPro)|GO:0006888(PANTHER)|GO:0016020(InterPro)|GO:0070973(PANTHER)
Taer1g05643 219 Coils Coil 140 181 - -
Taer1g05643 219 Coils Coil 189 209 - -
Taer1g05643 219 Coils Coil 112 132 - -
Taer1g05643 219 FunFam B-cell receptor-associated protein 29 136 199 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Taer1g05643 K14009 B-cell receptor-associated protein 31
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Taer Taer-Chr1:34787767 Taer1g05643 Taer-Chr1:51348516 dispersed
Taer Taer-Chr1:51348516 Taer7g01427 Taer-Chr7:9335777 dispersed