AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Taer1g05650 ATGAAATACAATGAAATCTCACATTTTAGCCACCCTCAACACCGGCTCAAACCCGGCTACACCGAGGTCCCTTTCAAGTGCGACGGTTGCAAGGAAGTCGGTATAGGGTCCAACTATAAATGCACAACATGTAACTATGATTTACATGTCCATTGTGCACTCCCATCCCCTTCCATCACTCACCCTTTCTACACCAAGTGTTCATTTCAATTCCTATCACGCCCTCCGGGTCCCATAGCGCGCTATTGCAATGCGTGCGAGAAAGTGGTCTCGGGGTTTGTTTACCATTGCAAGTTGTGTGGGTTTGACCTTCACCCTTGTTGTGCCAAGCTTCCAACTATGTTGGATGATGGTGAGGTGGAGTTGTACTTGTATCGAAAAGTGGGGTCCGCTTGTCATCGTTGTGGCAGGAAAGGACGAAGTTGGAGTTACCGGTCAACGTGCAAAAAGTACAACCTGCACGTGGCATGTGTGAAAGAGATGTTAGTGGAGAGTTGGCACGAGATTTACTTTGGTAGGGATGAGGCGAGGGGTGATTACCGCGATTCATATGGGCAAAATGGTAAAATTGAGACGAGAATTCCGAGCTTAAAGGGTACGTTGCAAAGCTATCACCATAATCATCGTCATCATCATAGGAAAGGTAAGGTGAAGAAATGTTGTGAGATGGCTGGTTTGGCAATGCAGTTTGTGATTTCGGCTGTTCTAGGTGATCCGACCACTTTAATCGCAGGTGTTGTTGGTGCTTTTATGTCTAAATAG 762 46.46 MKYNEISHFSHPQHRLKPGYTEVPFKCDGCKEVGIGSNYKCTTCNYDLHVHCALPSPSITHPFYTKCSFQFLSRPPGPIARYCNACEKVVSGFVYHCKLCGFDLHPCCAKLPTMLDDGEVELYLYRKVGSACHRCGRKGRSWSYRSTCKKYNLHVACVKEMLVESWHEIYFGRDEARGDYRDSYGQNGKIETRIPSLKGTLQSYHHNHRHHHRKGKVKKCCEMAGLAMQFVISAVLGDPTTLIAGVVGAFMSK* 254
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Taer1g05650 253 PANTHER CYSTEINE-HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN 2 250 - -
Taer1g05650 253 SUPERFAMILY Cysteine-rich domain 30 114 IPR046349 -
Taer1g05650 253 Gene3D - 12 58 - -
Taer1g05650 253 ProSiteProfiles Zinc finger phorbol-ester-DAG-type profile. 13 67 IPR002219 -
Taer1g05650 253 Pfam C1 domain 74 109 IPR004146 -
Taer1g05650 253 Pfam C1 domain 9 53 IPR004146 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Taer1g05650 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Taer Taer-Chr1:51426436 Taer7g00852 Taer-Chr7:5714827 dispersed