AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Taer1g05730 ATGGAGTTTGAACCGTTGGACGTCTTCACTTTTGGACAATGTCTTCACAACATTCAGCGATCATATCCAACAATTGATATGTGTGTTGTAGCCATTTCAACATTCAGTATCACACTCTCCATTTCCACCACCGTCCATTTCTCCGGCAACCAGCAAATCCACCGCCGGTTCAACATGTCTTCTGCAAAGCCTACCGCTCGTTCCATCTCTCAACAAGCCTTCGATGAAATGGTTAAGGAAAACATAGACGATCTAGGTATGGATCCAATGGAAGCCCTAAGTGACGCTGTCGAAACGCTAACTCTTCAAGGCGTAGATCTCTCCGGTATTGTTACAAATACACTCCCCGGAGAAACTAATCCGGTGATCCAGTCACTTGATAAAGTTAAACAGTTACAGTTCTCCGATTGGAGTGATGAAGCAGTTGTAGATGAGGCTCTAGGTTTGTTTGATAGTTTGATTGCAATGTCTTGTGTTGAAGGATCCGGAAGCGCTGCAATTGCTACGCGCAACGGAGGTGTAGAATTGATGTGTTCTGTTTGCTCGAAACTTAGCGTTGGTGACCGCAATTCAATTCGAGCGCTTGTATTGGCTTTAGATGTACTGGCTGTGTTTCTTCATGATCTTCAAAGTACAGAAACTTTTAGGCAAAGTGGAGGACCAAGAATGTTGGTTGACATCCTAACCAAAGAAACTCAAAATGTGAATATCCTGAACAGCGGTTTTGTTGTTGTGGCTGCTGCTTCGACTGGTAATGAGGTTATTAAGGAATCCTTTGTGGAATTACACATAGATGAGTTAATGGTGACAGTCATGAAGAAACATACCAAAGGAAGCATTCCCAGTTTATATGATGCAATTAGAGTGCTTTTGGCTGCTGATGATAGCCGCGTAGTGGCTTCACAAGTTTATGGCTATGCTCGACAATTTGCTAAGATTGGAATTGCTGAAGCTCTTGTGGAGTCATTAAATGATGGAATTAGCTCAGCAGGCTTTATATCAGCAACAATTGCGCTAAAAGCTGTCGCAGTAAATGATGAAATTTGCAGATCAGTTGCTGAGAATGGTGGTATAGATTCATTGCTCAGTTGTATTGATGAATCTGGTGTACAGGGGAATAAAATTGTGGCTAAAGCTTGTTGCTCCTTATTATCAAAGTTGGCAGGAAGTGACTTTAACAAGAGTGCCATTGTTGAAAGAGGAGGGCTGAACAGACTCATCACACTTTCTAGCAGACTTGCTGATGATCCTTCTGTCCTCCAAGAGGTGATGACCATCATATGCACTCTGTGCTTGCGATCACCTGCAAATGCGTCTTTGGCAATGGAAGCAGGAGCAGGAGACCTTGCTATCCAATCGATGCAAAAATTCCCTCACTCGTCTCAACTGCAGAAAAATTCTTGTCTTATGATCCGTAATCTTGTTGCTAGGAATCCAGAGAACAGGCCTATTTTATTGAGTAATGGTATTGAGAAGATAATAAGGAATGCCAAGGAAAGCCACAAAAACTGTAGAGATGCAGCAGTTGCTGCCCTTAGAGACTTGGGGCTTGAAAACTACAACTCATAG 1569 42.7 MEFEPLDVFTFGQCLHNIQRSYPTIDMCVVAISTFSITLSISTTVHFSGNQQIHRRFNMSSAKPTARSISQQAFDEMVKENIDDLGMDPMEALSDAVETLTLQGVDLSGIVTNTLPGETNPVIQSLDKVKQLQFSDWSDEAVVDEALGLFDSLIAMSCVEGSGSAAIATRNGGVELMCSVCSKLSVGDRNSIRALVLALDVLAVFLHDLQSTETFRQSGGPRMLVDILTKETQNVNILNSGFVVVAAASTGNEVIKESFVELHIDELMVTVMKKHTKGSIPSLYDAIRVLLAADDSRVVASQVYGYARQFAKIGIAEALVESLNDGISSAGFISATIALKAVAVNDEICRSVAENGGIDSLLSCIDESGVQGNKIVAKACCSLLSKLAGSDFNKSAIVERGGLNRLITLSSRLADDPSVLQEVMTIICTLCLRSPANASLAMEAGAGDLAIQSMQKFPHSSQLQKNSCLMIRNLVARNPENRPILLSNGIEKIIRNAKESHKNCRDAAVAALRDLGLENYNS* 523
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Taer1g05730 522 PANTHER UNCHARACTERIZED 63 516 - -
Taer1g05730 522 SUPERFAMILY ARM repeat 137 515 IPR016024 -
Taer1g05730 522 SMART arm-5 478 517 IPR000225 GO:0005515(InterPro)
Taer1g05730 522 SMART arm-5 345 389 IPR000225 GO:0005515(InterPro)
Taer1g05730 522 SMART arm-5 390 432 IPR000225 GO:0005515(InterPro)
Taer1g05730 522 SMART arm-5 434 476 IPR000225 GO:0005515(InterPro)
Taer1g05730 522 Gene3D - 301 520 IPR011989 -
Taer1g05730 522 Gene3D - 129 300 IPR011989 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Taer1g05730 K24166 armadillo repeat-containing protein 6