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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Taer1g05751 ATGGCGGACTCAAAACAACTTCATCATCTTCTTTCCAAACAACGCTCCTGGTCACCGGACATAAACCGCGACATCGAGTGGCAAAAGCTTAAGAACAATCAGCAACGCCGTTACAGCCACCGTCGCAGCAAAAGCATCGACGGAGATGCTGCTAATGAATTTAATGTTACTGATGATGATGTGAAGGAACTGAAAGCGTGCTTTGATTTAGGTTTTGGATTTGATTCATGTAGTGATTTTGATCCGAAACTTACGCAGGCGTTTCCTGCTCTCGAACTTTACGCTGCTGTTAACAGGCAGTATAATAGTAGATTATTGTCTAGGTCTTCGTCGATATGCTCTGATTCGTCGTCAACTTCGTCTAGTTCTTCAACTACTGTTATTGTAGATCCAAGTGATGATCCGAAGAAGGTGAAGATGAAATTGAAACAATGGGCGCAACTGGTATCTTGCTCAATTCTAGAAAGTTCTTCTCAGCTAACAAATAACAAAAATCCTGCAGAATAG 507 41.81 MADSKQLHHLLSKQRSWSPDINRDIEWQKLKNNQQRRYSHRRSKSIDGDAANEFNVTDDDVKELKACFDLGFGFDSCSDFDPKLTQAFPALELYAAVNRQYNSRLLSRSSSICSDSSSTSSSSSTTVIVDPSDDPKKVKMKLKQWAQLVSCSILESSSQLTNNKNPAE* 169
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Taer1g05751 168 MobiDBLite consensus disorder prediction 111 130 - -
Taer1g05751 168 PANTHER OSJNBA0071G03.3 PROTEIN 9 154 - -
Taer1g05751 168 MobiDBLite consensus disorder prediction 111 135 - -
Taer1g05751 168 Pfam Protein of unknown function (DUF1685) 56 112 IPR012881 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Taer1g05751 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Taer Taer-Chr1:52232425 Taer7g01807 Taer-Chr7:11751342 dispersed
Taer Taer-Chr1:52232425 Taer2g02249 Taer-Chr2:96441382 transposed
Taer Taer-Chr1:52232425 Taer10g01209 Taer-Chr10:8860104 transposed