AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Taer1g05849 ATGATTACAATAATGCTTTTTAGATATTTTGAAATAAAAGTATACCCTTCACACCCTATCCCTCCCCTCCCGATATTTCTTCCTTTTCACCCCTATATAACCAACCCCTCACCCACTTCAACAACACACCTCACTCACACTCAACTTCATCTTCTACACAACAACCTTCACTTTTCATCAATGGCGTCCATGGCTACAAGCTTTGCATCATCACTCTCCACCAAAACCAGAACATGTTTCTTCGATCAATCATCCTTCCATGGCGTTCCGGTTTCTTCTCCGATCCGTATCCAGTCTGTGAAATCGAACAACAGGAACATGCCGATCTCCATGTCTGCTGCTTCCTACGACCTCGGATCGTTTACGTTTCAACCGATCAAGGAGTCGATCGTGTCTCGTGAAATGACCAGGAGGTACATGACTGATATGATCACCTACGCTGATACTGACGTTGTTGTAGTCGGTGCTGGCTCTGCTGGTCTCTCATGCGCATATGAGCTTAGCAAAAACCCTAACGTTCAGGTAGCCATCATTGAGCAGTCTGTGAGCCCTGGTGGTGGAGCATGGCTCGGAGGACAACTGTTCTCGGCCATGGTTGTCCGCAAACCAGCACACCACTTCCTGGACGAGCTCGAGATCGAGTACGACGAGCAAGAAGACTACGTGGTCATCAAGCACGCTGCTCTGTTCACATCAACCATCATGAGCAAGCTTTTGGCTAGACCAAATGTGAAGCTGTTCAACGCGGTTGCAGCAGAGGATTTGATCATCAAGAATGGAAGAGTAGGTGGTGTTGTGACCAACTGGGCTTTGGTGTCCATGAACCATGACACACAGTCGTGCATGGACCCAAATGTGATGGAAGCTAAGGTTGTGGTGAGCTCATGTGGTCATGATGGTCCCATGGGTGCCACCGGGGTGAAGCGGTTGAGGAGCGTTGGGATGATTGAAAGCGTTCCTGGAATGAAAGCTCTTGACATGAACACTGCTGAAGATGAAATTGTGAAGATGACAAGAGAGGTGGTTCCTGGTATGATTGTCACCGGAATGGAAGTTGCAGAGATTGACGGATCTCCAAGAATGGGACCAACATTTGGGGCTATGATGATATCTGGACAGAAGGCGGCTCATTTGGCATTGAAGGCGTTGGGGCTACCGAATGCTTTGGATGGAACCAGTGTCGCAAACATGCAGCCGGAGATGATCCTTGCTGCTGCTGATTCCAGTGAGATTGTGGATGCTTGA 1245 48.51 MITIMLFRYFEIKVYPSHPIPPLPIFLPFHPYITNPSPTSTTHLTHTQLHLLHNNLHFSSMASMATSFASSLSTKTRTCFFDQSSFHGVPVSSPIRIQSVKSNNRNMPISMSAASYDLGSFTFQPIKESIVSREMTRRYMTDMITYADTDVVVVGAGSAGLSCAYELSKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHHFLDELEIEYDEQEDYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIIKNGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPMGATGVKRLRSVGMIESVPGMKALDMNTAEDEIVKMTREVVPGMIVTGMEVAEIDGSPRMGPTFGAMMISGQKAAHLALKALGLPNALDGTSVANMQPEMILAAADSSEIVDA* 415
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Taer1g05849 414 PANTHER THIAMINE THIAZOLE SYNTHASE 69 413 - -
Taer1g05849 414 Pfam Thi4 family 132 365 - -
Taer1g05849 414 SUPERFAMILY FAD-NAD(P)-binding domain 106 376 IPR036188 -
Taer1g05849 414 Hamap Thiamine thiazole synthase, chloroplastic [THI4]. 66 392 IPR027495 GO:0009228(InterPro)
Taer1g05849 414 Gene3D - 148 393 IPR036188 -
Taer1g05849 414 FunFam Thiamine thiazole synthase, chloroplastic 148 383 - -
Taer1g05849 414 Gene3D - 117 147 - -
Taer1g05849 414 NCBIfam sulfide-dependent adenosine diphosphate thiazole synthase 128 383 IPR002922 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Taer1g05849 K03146 cysteine-dependent adenosine diphosphate thiazole synthase [EC:2.4.2.60]