AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Taer1g05879 ATGGCACCTTCATCTTCATCCTTCGTAACAACGCTAATCATCACCATACTCGTCACTTGTACCCATACTCCAAACGTACAAGCCCTAAAAGCACCAATTCATCCAGAAGACATACTCCCTCTTTTGCCCCGTCAAGTTTCATGGCCTATTCTCAACTCTCTTCGCGGCGCCTCCGATCTTCTTCCAAGCTTCGTCGGCGCCGCTGCGGTGGCGAATAACTCCGATTTGCGGTGGAAAGGCTCGTGCTTTTACGAAAACACTGCGTGGTTAGAGCTTCATAATAAAAGTGGTAGTGAATTTGGGGGAGGCACACTTCATATCAAGGTAAGCAAGGCACACAGTTGGACATGTATGGATATTTATGTCTTTGCGACTCCGTATCGTGTGACGTGGGACTATTATTTTATATCCCGAGAGCATACGCTTGAGTTCGATGAATGGAGTGAGAAAGCTGAGTATGAATATGTGAAACGTAAAGGAGTTTCAATTTTTCTCATGGAAGCAGGAATGATAGGAACTCTAGAAGCATTATGGGAGGTCTTCCCTTTATTCACAAATACGGGTTGGGGGGAGAGTTCTAATCTTGCTTTTCTCAAGAAACATATGGGAGCTAATTTTGAGGTGCGACCCGAACCATGGATAACAAACATAACCCAAGATGATATTCATTCAGGGGACTTCCTTGCAATATCAAAAATCCGTGGTAGATGGGGCGGGTTTGAGACCCTTGAAAAATGGGTATCCGGGGCATACGCTGGTCATTCTGCTGTTTGCTTGAGGGACCCGCAAGGAAAACTATGGGTTGGTGAATCTGGACATGAAGATGACGAGGGCCAAGATGTTATTGCATTGTTACCATGGGATGAGTGGTGGGAATTTGAGTTGACCAAAGATGATGCTAATCCACATATTGCTTTGCTTCCTTTGCATCCTGATCTACGGTCTAGATTTAATGAAACCGCTGCTTGGGAGTATGCACAAAGTATGGTTGGGTTGCCATATGGTTATCATAATTTGATATTTAGTTGGATAGATACTGTCAGTGATAATTATCCACCACCTTTGGATGCTAATCTGGTTGCATCTGTTATGACAGTGTGGGATCAAATGCAGCCTGCATATGCAGCTAATATGTGGAATGAAGCCTTGAATAAACGGCTTGGTACTCAGGGGCTTGAACTTGCTGAGATATTAGTGGAAGTTGAAAAACGTGGTTCATCTTTTGCTGAATTACTGACAATACCCGAACAAGATGATTGGGTATACGCTGATGGAAAGTCAACTTCTTGTGTTGCTTTCGTACTTGAAATGTACAAAGAAGCAGGACTTTTTGGAGATCTTGCAGACCAAATTCAAGTTACCGAGTTCACGATAAAGGATGCTTACACGCTCAACTTTTATGAAAACAATTCGAGTCGTCTGCCAAAATGGTGTAATGAAGGCGATACGGTTGAGCTTCCATTTTGTCAAATTAAGGGAAAATATCGAATGGAACTACCAGGATACAATACCATTGACCCGTACCCGCATATGACTGAAAGTTGCCCATCGCTACCCCCAGATTATTCAAGGCCCCAGTACTGCTAA 1587 43.54 MAPSSSSFVTTLIITILVTCTHTPNVQALKAPIHPEDILPLLPRQVSWPILNSLRGASDLLPSFVGAAAVANNSDLRWKGSCFYENTAWLELHNKSGSEFGGGTLHIKVSKAHSWTCMDIYVFATPYRVTWDYYFISREHTLEFDEWSEKAEYEYVKRKGVSIFLMEAGMIGTLEALWEVFPLFTNTGWGESSNLAFLKKHMGANFEVRPEPWITNITQDDIHSGDFLAISKIRGRWGGFETLEKWVSGAYAGHSAVCLRDPQGKLWVGESGHEDDEGQDVIALLPWDEWWEFELTKDDANPHIALLPLHPDLRSRFNETAAWEYAQSMVGLPYGYHNLIFSWIDTVSDNYPPPLDANLVASVMTVWDQMQPAYAANMWNEALNKRLGTQGLELAEILVEVEKRGSSFAELLTIPEQDDWVYADGKSTSCVAFVLEMYKEAGLFGDLADQIQVTEFTIKDAYTLNFYENNSSRLPKWCNEGDTVELPFCQIKGKYRMELPGYNTIDPYPHMTESCPSLPPDYSRPQYC* 529
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Taer1g05879 528 PANTHER OS01G0793500 PROTEIN 8 528 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Taer1g05879 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
161629 Taer1g01398 Taer1g05879
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
5245540 Taer Taer1g01398 Taer-Chr1:23093018 Taer1g05879 Taer-Chr1:53156534
5248498 Taer Taer1g05879 Taer-Chr1:53156534 Taer9g03142 Taer-Chr9:31474705