Gene detail

Gene Search

Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Taer1g05900	ATGGCAAAAAGCTCATTCAAACTCGAACATCCCCTCGAGAGACGTCAAGCTGAGGCGGCTCGTATTAGGGAAAAGTACCCTGACAGAATCCCGGTTATTGTGGAGAAGGCTGAAAGATCCGACATACCTGACATAGACAAGAAGAAATATCTGGTGCCTGCTGATCTGACTGTTGGACAGTTTGTTTATGTGGTGAGGAAGAGGATTAAACTGAGTCCTGAAAAAGCCATCTTTATCTTTGTGAAGAACATTCTACCACCTACTGCTGCCATGATGTCTGCTATATACGAAGAAAACAAAGACGAGGATGGCTTCCTCTACATGACTTACAGCGGGGAGAACACGTTTGGAGCTTGTTGA	360	45.0	MAKSSFKLEHPLERRQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGAC*	120

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Taer1g05900	119	Gene3D	-	1	118	-	-
	Taer1g05900	119	PANTHER	MICROTUBULE-ASSOCIATED PROTEINS 1A-1B LIGHT CHAIN 3-RELATED	3	117	IPR004241	GO:0006995(PANTHER)
	Taer1g05900	119	SUPERFAMILY	Ubiquitin-like	3	117	IPR029071	-
	Taer1g05900	119	FunFam	Autophagy-related protein	1	117	-	-
	Taer1g05900	119	Pfam	Autophagy protein Atg8 ubiquitin like	14	117	IPR004241	-
	Taer1g05900	119	CDD	Ubl-ATG8	12	114	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Taer1g05900	K08341	GABA(A) receptor-associated protein

Event-related genes

Select	Gene_1	Gene_2	Event_name
	161303	Taer11g00339	Taer1g05900
	161628	Taer1g01386	Taer1g05900

Duplication type information

Select	Gene1	Location1	Gene2	Location2	E-value	Duplicated-type
	5245535	Taer	Taer1g01386	Taer-Chr1:23047509	Taer1g05900	Taer-Chr1:53261821
	5247630	Taer	Taer1g04552	Taer-Chr1:43649526	Taer1g05900	Taer-Chr1:53261821
	5248508	Taer	Taer1g05900	Taer-Chr1:53261821	Taer5g02463	Taer-Chr5:76411200
	5270155	Taer	Taer1g05900	Taer-Chr1:53261821	Taer11g00339	Taer-Chr11:3205390