AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Taer1g05942 ATGTCGGAACATAGCACAGTTAGTACAGCCAGCGGCCCGGATTTCAACCTACCTGATGAAATACTATCGGTGATCCCTGCGGATCCTTATGACCAGTTAGATCTTGCTCGGAAGATCACTTCAATGGCGCTTGCATCACGCGTGTCTAAACTGGAGTCGGAAGCAGGGAGGTTGAGGCATAAGTTGAATGAGAAAGATAGGGTTATAATGGAACTGGAAGAGAAAGTGGATGAATTGAAGCAGACTTGTCATAATTCTCAGTTGCGGATGCAGATTACGGTTGAAGATAATAGGAAGCTTACGGAGGAGAGAGATTCGTTGGCGAGGACTGTTAAGAAATTAGGGCGCGATTTAGCTAAGCTGGAGGCGTTCAAGCGGCAATTAATGCAGTCATTGAACGAAAATGATTCAGCTCCGGCAGCAACTGTAGATATAGGCACGTATGACCATTCTGCTCCCAAAGCTTATCCGCTGAATGAAGAGGAGACAAATGGCTATAGAAGGCATCATTCTTATAGTGGGTCTGCTGATGGTGGTAACATACATGATGACGCCTCAAAGCTTGCTGGTCAAAGGTATTCCGTGACACCGTATATCAGCACACGTGTAACGCCAACTGCAACCCCCAAAACAATCTCTGCAAGTGTGTCTCCTAGAAGGTATTCTGCTTCTGGTACTACATCCCCAACAAAAATTCAATATGAAAGTCGTACCACAATGTCATCATGGTACCCATCGAGTCAGCAATCTTCAGCTGGAAACTCTCCTCCTCGTGGCCCCCCTATACCAGGCCGTGCTGCCAAGATTGATGGAAAAGAGGTCTTCCGTCAAGCAAGGAGTCGCCTGTCTTATGAGCAATTCAGTGCTTTTTTAGCAAACATAAAGGAGTTAAATGCTCAAAAGCAATCTCGTGAGGAGACTTTGAGGAAGGCAGAAGAGATATTTGGGTCTGAAAACAAGGATCTTTATCTATCATTTCAAGCTCTACTAAATCGCAACAAACAATGA 1008 45.14 MSEHSTVSTASGPDFNLPDEILSVIPADPYDQLDLARKITSMALASRVSKLESEAGRLRHKLNEKDRVIMELEEKVDELKQTCHNSQLRMQITVEDNRKLTEERDSLARTVKKLGRDLAKLEAFKRQLMQSLNENDSAPAATVDIGTYDHSAPKAYPLNEEETNGYRRHHSYSGSADGGNIHDDASKLAGQRYSVTPYISTRVTPTATPKTISASVSPRRYSASGTTSPTKIQYESRTTMSSWYPSSQQSSAGNSPPRGPPIPGRAAKIDGKEVFRQARSRLSYEQFSAFLANIKELNAQKQSREETLRKAEEIFGSENKDLYLSFQALLNRNKQ* 336
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Taer1g05942 335 MobiDBLite consensus disorder prediction 208 255 - -
Taer1g05942 335 MobiDBLite consensus disorder prediction 208 266 - -
Taer1g05942 335 Coils Coil 294 314 - -
Taer1g05942 335 Coils Coil 97 117 - -
Taer1g05942 335 Gene3D - 31 168 - -
Taer1g05942 335 PANTHER OS03G0659800 PROTEIN 14 333 - -
Taer1g05942 335 Coils Coil 55 89 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Taer1g05942 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Taer Taer-Chr1:25647262 Taer1g05942 Taer-Chr1:53581562 dispersed
Taer Taer-Chr1:53581562 Taer7g01287 Taer-Chr7:8525057 transposed