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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Taer1g05946 ATGAATGGTGAAATTCTTACGCAGAAGAAGGTACCTGAAATGAACTTTATTAGCACAAAGATTGACCTCGAAACGGGAATACTTTATGTGGAATCTCCTCGGTGCAAAGAGAAGCTGCATATTGAACTTGGATCAAATTCATCTGCTGCTGTTGAAGAAATCAATGTACATGCCCAAAGATATGAAGTTATGGGCTATGATAACAAAATCGACACGTGGTTTAGTAATGCAGTTGGCCGGCCTTGTTATTTATTAAGATCTAGCTCCAGAAGTTGTACCCTTTTGAATAGAAGCAAAAACACGAGCATATGCAGAGACATAAAGACCAGATTAAACTTTGTTAATGAAGCTCAGCTTTTATTGATATCTGAGGAGAGCGTATCTGACCTCAACTATAGACTAAACTCAATTAAAGAAGAAGGGTCTGTTGGATTACTTAGGGAAGTTGATGCAATGAGATTCCGGCCCAATATCGTGATATCTGGTGGCGGGCCGTATGCTGAAGACAGATGGAGTGGCCTTAAGATTGGAAAAAATCACTTCATGTCGTTAGGTGGTTGCAATCGTTGCCAGATGATCAATTTGAATTATCAAGCCGGTGAGGTGGAGAAATCAAACGAGCCTCTAGCTACATTAGCAGCGTACAGGAGGGCAAAGGGGAAAATACTGTTTGGAATTTTATTGAGATGTGAGTTTGACAGTGAGATTGAGGATGAAATATCTTCATGGATTCAAGTGGGACAGGAAGTATACCCTGATGCATGA 765 40.39 MNGEILTQKKVPEMNFISTKIDLETGILYVESPRCKEKLHIELGSNSSAAVEEINVHAQRYEVMGYDNKIDTWFSNAVGRPCYLLRSSSRSCTLLNRSKNTSICRDIKTRLNFVNEAQLLLISEESVSDLNYRLNSIKEEGSVGLLREVDAMRFRPNIVISGGGPYAEDRWSGLKIGKNHFMSLGGCNRCQMINLNYQAGEVEKSNEPLATLAAYRRAKGKILFGILLRCEFDSEIEDEISSWIQVGQEVYPDA* 255
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Taer1g05946 254 SUPERFAMILY MOSC N-terminal domain-like 2 94 - -
Taer1g05946 254 ProSiteProfiles MOSC domain profile. 87 253 IPR005302 GO:0003824(InterPro)|GO:0030151(InterPro)|GO:0030170(InterPro)
Taer1g05946 254 Pfam MOSC domain 109 251 IPR005302 GO:0003824(InterPro)|GO:0030151(InterPro)|GO:0030170(InterPro)
Taer1g05946 254 Pfam MOSC N-terminal beta barrel domain 2 81 IPR005303 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Taer1g05946 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Taer Taer-Chr1:53636000 Taer4g02156 Taer-Chr4:47281532 dispersed