AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Taer4g00711 ATGGGTGAAACGAAATCATCTTCAGATAACAGATTAAAACCATCTTTAAAGTATTCTGATGAGAATCAAGCGCCATTCAAGTGTAAAAACAACAATGTGCAGTCAAATTTGAAGCCTAGATCGATTTGGGGCTCAAATATTGTGAAAGGGTTTTCAGCTGATAAGAAAACAAGATCACAACAAGTGGGTAAAAAATCTCAACAAAATGTTGTTACTACAACAGTCTCCAATACAAGTTCTAAAAACCCTTTTGTTCCTACTCGGGCGAAAAGGTCTTTAATTGGGGATTTAGCATGTTCTGTTGGTTCTACACAGGTTCATCCTCAAGGTGTTCATCAGCATTGCGATCAGAATCATCGGTTGTATAAATCGTCGTCTTCTTCGGGTTCTCGTGATCTGTTTGCTGAGCTTGATCAGCTCAGAAGCTTGCTTCAAGAATCTAAAGACAGAGAAAGTAAATTGCAAGGTGAGTTGTGTGATTTCAAGAAGAAAAATCTTCAGGCTTTGGAGTTGGAACGAACGGTTGAGTCGAAGAATTGTGAAATTGATTCTCTTAAGAGTAAAATTGATTTGCTGGAATCAGAAAACACTAGTCTTTCTGAACAGTTGAATTGTCAGCAGTTGGAAAATATAAAAAAAGGAGTTGTTAATAGTGTTGAAGTAGATGTTCTTAAGTTGAGGAGGTTGAATGCTGAGCTTCATCTTCAAAAAAGAAATCTTTGTTGCAGGATATCTTCAATGGAGTCAGAACTTGCTGCCATTGCCAAAGATTCTGAGAATGAATTTGTTAAGAAGATAAAAGCTGAGGCATCTATGTTAAGACAAACAAATGAAGATTTATGTAAACAAGTTGAAGATCTTCAAGTAAGTCGATTGAACGAGGTCGAGGAGCTTGTGTATCTTAGATGGGTCAATTCCTGTCTTAAAAATGAGTTGCAAAATTCTGCATTTGTGAATTCTGAAATAACGTCAAGTCCAGCTTCTGTTGAATGGCTCAATGGTTCTATATCAAGTGATGAAAGTTCTGAACATGGAAGCACCCAAAAAAAGTTAAGTTTGATTAAGAAAATGAAAAAGTGGCCTGTTCTAGATGAAGAAACGAACGCTTCTGAACCCATTAGCTATAAACTAAATCTTGGTTGGTCAGAAGGAAGACGGCATTCTATTAGCGGAGCAAATTGCTGTCAGGAAGATCTAGTGGTGAATAAAAGAAGACAATCTGAGGGTTTTATATGTTCAATGGAGATGGAGGGCATGAATGATTTGAATGTGATCCAAGGGTCACAATTGCGTGAAGCAACGAAGCTGAAAACATTTTTGGATGTTGAAAAAAGGGCGCTACGTGTTCCTAATCCCCCTCCGAGGCCTTCTAGCTTTACTTCTAAGGAACATACAGAGGTTACTAGTAAAGCACCACCACCGCCACCTCCACCTCCACCACCACCGCCACCTAAGTTCATGGGAAGAAACAATGGTGGAGGGGTTGTTCAACGAGCTCCAGAAGTGGTTGAGTTTTATCATTCTCTTATGAAAAGGGACTCCAGAAAAGATGCACTAAATGATGGGATTTGTGACACCTTAGATGTGAATAATGTCCGACATAGTATGATTGGTGAAATTGAAAACCGGTCATCACATTTGCTTGCTATAAAGGAGGATGTTGAGACTCAAGGGGAATTTGTCAATTCCTTAATACACGAGGTCAACAATGCTGTTTATCCAGATATAGAGGATGTGGTGGCTTTTGTAAACTGGCTGGATGATGAACTCGGTTTTCTTGTGGATGAGAGGGCGGTCCTGAAACACTTTGATTGGCCAGAGAAGAAAGCGGACACATTAAGAGAGGCAGCATTTGCATATCGCGACCTAAAGAAGCTGGAGCATGAAATTTCAAATTACAAGGATAATTTCCACATACCATGTGACTTGGCATTGAAGAAAATGGTTTCCTTGTCTGAAAAGATGGAGCGTATCGTTCATAACCTTCTTAGAACAAGAGAATCGTTGATGCGTAATTGCAAAGAGTTCCATGTTCCCACAGATTGGATGCTTGATTTGGGAATTTTAAACAAGATTAAGCTGGGATCGGTTAAATTGGCAAAGAAATACTTGAAAAGAGTTGCTACCGAGCTTCAAACGAAGGGAGCATCAGAGAAAGATTCTTCTATGGACTATATGCTACTTCAAGGAGTGCGGTTTGCTTTCCGCATTCATCAGTTTGCTGGTGGATTTGATGTCGACACAATGCATGCGTTCGAGGAGCTTCGGAATGTAGCTCTTGTTTTGAACAAAAAGTAG 2298 39.47 MGETKSSSDNRLKPSLKYSDENQAPFKCKNNNVQSNLKPRSIWGSNIVKGFSADKKTRSQQVGKKSQQNVVTTTVSNTSSKNPFVPTRAKRSLIGDLACSVGSTQVHPQGVHQHCDQNHRLYKSSSSSGSRDLFAELDQLRSLLQESKDRESKLQGELCDFKKKNLQALELERTVESKNCEIDSLKSKIDLLESENTSLSEQLNCQQLENIKKGVVNSVEVDVLKLRRLNAELHLQKRNLCCRISSMESELAAIAKDSENEFVKKIKAEASMLRQTNEDLCKQVEDLQVSRLNEVEELVYLRWVNSCLKNELQNSAFVNSEITSSPASVEWLNGSISSDESSEHGSTQKKLSLIKKMKKWPVLDEETNASEPISYKLNLGWSEGRRHSISGANCCQEDLVVNKRRQSEGFICSMEMEGMNDLNVIQGSQLREATKLKTFLDVEKRALRVPNPPPRPSSFTSKEHTEVTSKAPPPPPPPPPPPPPKFMGRNNGGGVVQRAPEVVEFYHSLMKRDSRKDALNDGICDTLDVNNVRHSMIGEIENRSSHLLAIKEDVETQGEFVNSLIHEVNNAVYPDIEDVVAFVNWLDDELGFLVDERAVLKHFDWPEKKADTLREAAFAYRDLKKLEHEISNYKDNFHIPCDLALKKMVSLSEKMERIVHNLLRTRESLMRNCKEFHVPTDWMLDLGILNKIKLGSVKLAKKYLKRVATELQTKGASEKDSSMDYMLLQGVRFAFRIHQFAGGFDVDTMHAFEELRNVALVLNKK* 766
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Taer4g00711 765 Coils Coil 263 283 - -
Taer4g00711 765 MobiDBLite consensus disorder prediction 1 37 - -
Taer4g00711 765 Coils Coil 130 157 - -
Taer4g00711 765 MobiDBLite consensus disorder prediction 469 487 - -
Taer4g00711 765 MobiDBLite consensus disorder prediction 447 493 - -
Taer4g00711 765 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 33 757 IPR040265 GO:0009658(PANTHER)|GO:0009707(PANTHER)
Taer4g00711 765 SUPERFAMILY Formin homology 2 domain (FH2 domain) 474 628 - -
Taer4g00711 765 Coils Coil 609 636 - -
Taer4g00711 765 Coils Coil 168 209 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Taer4g00711 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Taer Taer-Chr4:5409612 Taer7g03436 Taer-Chr7:40686477 dispersed
Taer Taer-Chr4:5409612 Taer8g02414 Taer-Chr8:64288440 transposed