AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Taer4g00764 ATGATATATGTTTATTGGATTCTAATACTTACAACTATAAGCATTAGATGTGCAAGGTTACCCAATCGACGTGAGCTCATTTCTAGGGCTCACAATCTTCTTCATTTACCTTCAAACAACTTTCAGCAATCACTCAATTTCCAATCAATGGCGACTCCTGATGTTTTTCTGCAAGGCGAACGCGATCATTTCTCTTCCTCATCTCAATTTGATCATACAAAAGGAGATGCTAAATCACGAGGATTTGATCTCGAGAAGAAAATTGAATACCTTGAGAGCTTGAACGACAAAGTTAGCAACAGACGGGCACGTAGATGGATAAATGATCGTATACTATTGGAGCTTGTACCTCGTTTGACAGGAGATGAAATTAGAGGGTTGTTTGCTCCACCACCTTGGGGTGATGAGCCACAACCGTCACCATTTTGCATGACAAATGTGGGGGAATGGGACAAATTTAGGAATATTGACATGGATAAAGAGGCTGGTGCAATAAAGGCTCTTAAAGGTCCCTCATCAAAGAAAAAAAGTAATGTGGATGCTGATAAGATAGCTGCGTTGACTGCATGGCACAGGGTTGACTGCAGAACTAGAGAGGCATTTCGCCGAAGCTTCCTTCCAGAACTTGTTAATGGTTTCGAGGAGAATATACGGACCTTTGTCTCGGAGGCAACTAATGAGGAGGTTCTTGTGATGTCTGCCCAAGATCCTTTCCATAGGTTGTTACTTCATGGTGTTTGTGAGTTCTATAACTTGGTGTCAACAACTGAATCCGAGACTAAAGGTACAAAGGTCTTGAAGATGACCAAAATCAAGAAGAAAAAGGCTGGCAATAACGAGCTCCCAACCATCACCCTTTGCGAGTTCCTGAAAATGGCAAAAGGTGGTTTTTGGTAG 897 41.92 MIYVYWILILTTISIRCARLPNRRELISRAHNLLHLPSNNFQQSLNFQSMATPDVFLQGERDHFSSSSQFDHTKGDAKSRGFDLEKKIEYLESLNDKVSNRRARRWINDRILLELVPRLTGDEIRGLFAPPPWGDEPQPSPFCMTNVGEWDKFRNIDMDKEAGAIKALKGPSSKKKSNVDADKIAALTAWHRVDCRTREAFRRSFLPELVNGFEENIRTFVSEATNEEVLVMSAQDPFHRLLLHGVCEFYNLVSTTESETKGTKVLKMTKIKKKKAGNNELPTITLCEFLKMAKGGFW* 299
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Taer4g00764 298 PANTHER R3H DOMAIN-CONTAINING PROTEIN 4 51 295 IPR039629 -
Taer4g00764 298 ProSiteProfiles R3H domain profile. 207 275 IPR001374 GO:0003676(InterPro)
Taer4g00764 298 Pfam R3H-associated N-terminal domain 85 203 IPR025952 -
Taer4g00764 298 SUPERFAMILY R3H domain 190 269 IPR036867 GO:0003676(InterPro)
Taer4g00764 298 Gene3D - 204 295 IPR036867 GO:0003676(InterPro)
Taer4g00764 298 CDD R3H 213 264 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Taer4g00764 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Taer Taer-Chr4:5788714 Taer4g02479 Taer-Chr4:55269697 wgd