Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Taer4g02310 | ATGGGGATTTGCTTCTCGTCGACTCCGGCTGATGATGATGAGTCCGATAGTCATGCTCATTTTGCGGGAGGTAATGTGACTCTCATCACTACTAAGAATGCCTGGGACCAAAAGCTGGCAGAAGCAAAGACTGAAGGCAAAGTAGTGATTGCCAACTTCAGTGCAACTTGGTGTGGTCCTTGCAAATCAATTGCACCGCACTACGTTGAGCTATCAGAGAAGTATCCTTCTCTTATGTTTCTGACCGTAGATGTTGATGAGTTAACGGAGTTTAGCACACAATTGGATGTGAAAGCTACTCCAACATTCTTCTTCTTTAAAGATGGTAAAGAGATTGATAAACTTGTGGGAGCCAACAAGCCTGAACTGCAGAAAAAGATAACCGCCATTGTTGATTCACAGGTTCCCACTGGTCACAAGTAA | 423 | 43.97 | MGICFSSTPADDDESDSHAHFAGGNVTLITTKNAWDQKLAEAKTEGKVVIANFSATWCGPCKSIAPHYVELSEKYPSLMFLTVDVDELTEFSTQLDVKATPTFFFFKDGKEIDKLVGANKPELQKKITAIVDSQVPTGHK* | 141 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Taer4g02310 | 140 | Gene3D | Glutaredoxin | 1 | 138 | - | - | |
| Taer4g02310 | 140 | ProSitePatterns | Thioredoxin family active site. | 50 | 68 | IPR017937 | - | |
| Taer4g02310 | 140 | CDD | TRX-family | 39 | 127 | - | - | |
| Taer4g02310 | 140 | Pfam | Thioredoxin | 27 | 128 | IPR013766 | - | |
| Taer4g02310 | 140 | ProSiteProfiles | Thioredoxin domain profile. | 20 | 132 | IPR013766 | - | |
| Taer4g02310 | 140 | SUPERFAMILY | Thioredoxin-like | 23 | 131 | IPR036249 | - | |
| Taer4g02310 | 140 | PRINTS | Thioredoxin family signature | 57 | 66 | - | - | |
| Taer4g02310 | 140 | PRINTS | Thioredoxin family signature | 49 | 57 | - | - | |
| Taer4g02310 | 140 | PRINTS | Thioredoxin family signature | 96 | 107 | - | - | |
| Taer4g02310 | 140 | PANTHER | THIOREDOXIN | 24 | 129 | IPR050620 | - | |
| Taer4g02310 | 140 | FunFam | Thioredoxin | 23 | 132 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Taer4g02310 | K03671 | thioredoxin |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 5254770 | Taer | Taer4g02310 | Taer-Chr4:53014744 | Taer5g03340 | Taer-Chr5:84894565 | |
| 5268008 | Taer | Taer10g01089 | Taer-Chr10:8040707 | Taer4g02310 | Taer-Chr4:53014744 | |
| 5270896 | Taer | Taer2g01730 | Taer-Chr2:91743262 | Taer4g02310 | Taer-Chr4:53014744 | |
| 5288687 | Taer | Taer4g00807 | Taer-Chr4:6123528 | Taer4g02310 | Taer-Chr4:53014744 |