AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Taer4g02319 ATGAGACGTGACCGTCTTGGTGCGTTCTCTACATTTATATTCTTCTTCTTCTTCTTCTTTATATATATATATACTTACTTTCATCTTTCAACTCTGTCTACTCATCGCCGCCTGTATCATCAATTACATACACATTTCATTCATCACCATCCATTAAGGTTCATTTCGCGCTGCTTCAACGCGATCAGTGATCGCAAAATATGTCTACTATTGCTCTTACCAAATCTAACCTGCAAGCAACAACAACTCGTCGATTTCACCGGTTTTTCTCTCCGATCAAAGCCAGATTTGCTATCTAATCACCGGATTAATGTTTCTGCCGGCGGAGATGGCGGTAGTTCCGGCGTTGGTCACGGCGGAGGAGGTGGCGGCGACTGGAACAATAACAGCGGTGGCGGAAACTCCGATGATTCATCATCCGGTGACAGTTTTGGTCCGATTGGGGCTTTTGTTAGTGGTTGGAGATCTAGGGTTGCAGCTGATCCCCAATTTCCATTCAAAGTGTTAATGGAACAAGTTGTTGGTGTGAGTGCAAATGTGTTTGGTGATATGGCAACTCGTCCTAATTTCGGTTTAAACGAGCTCGATTTCGTGTTCTCCACGTTAGTAGTGGGATCAATATTGAATTTCACTCTAATGTATCTATTAGCGCCAACTATGACATCTGGTTCAGCAGCTTTACCTTCGATTTTCGCTAACTCACCTGCGAGTCACATGTTTGAGCCTGGGGCATACACTCTGGCTAACCGGTTAGGCACATTTGTATACAAAGGAGTTGTGTTTGCAGCTGTGGGTTTTGCAGCTGGTTTAGTTGGAACCGCGTTGTCGAATGGGTTGATCAAGATGAGGAAGAAGATGGACCCTAGTTTTGAGTCACCAAACAAGGCTCCACCAACTGTTTTGAACGCGATCACTTGGGCGATTCATATGGGGTTAAGTAGTAATTTGAGGTACCAAAGTTTGAATGGGATCGAGTTCATGTTGGCAAAAGGGTTGTCGCCATTGATGTTTAAGAGCTCAGTGGTTGGATTGAGATTGATTAACAATGTTCTTGGTGGGATGACATTTGTGATGTTAGCAAGGTTGACTGGTTCACAAAGTGCTGGTGGTGATGAAGACAAGATTGTTGATGATGAGAGCTCAGATGAGGAGAAGAAGTTGTTGGCTAATCAAATTGCTTCAAAGTGA 1188 43.77 MRRDRLGAFSTFIFFFFFFFIYIYTYFHLSTLSTHRRLYHQLHTHFIHHHPLRFISRCFNAISDRKICLLLLLPNLTCKQQQLVDFTGFSLRSKPDLLSNHRINVSAGGDGGSSGVGHGGGGGGDWNNNSGGGNSDDSSSGDSFGPIGAFVSGWRSRVAADPQFPFKVLMEQVVGVSANVFGDMATRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTMTSGSAALPSIFANSPASHMFEPGAYTLANRLGTFVYKGVVFAAVGFAAGLVGTALSNGLIKMRKKMDPSFESPNKAPPTVLNAITWAIHMGLSSNLRYQSLNGIEFMLAKGLSPLMFKSSVVGLRLINNVLGGMTFVMLARLTGSQSAGGDEDKIVDDESSDEEKKLLANQIASK* 396
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Taer4g02319 395 MobiDBLite consensus disorder prediction 127 141 - -
Taer4g02319 395 MobiDBLite consensus disorder prediction 108 141 - -
Taer4g02319 395 PANTHER PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED 90 368 - -
Taer4g02319 395 MobiDBLite consensus disorder prediction 366 395 - -
Taer4g02319 395 MobiDBLite consensus disorder prediction 371 389 - -
Taer4g02319 395 Pfam Protein RETICULATA-related 157 324 IPR021825 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Taer4g02319 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
5240813 Taer Taer10g00912 Taer-Chr10:6774356 Taer4g02319 Taer-Chr4:53081604
5244831 Taer Taer1g00339 Taer-Chr1:14517928 Taer4g02319 Taer-Chr4:53081604