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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Taer4g02320 ATGCATATGAGTCTTCAGTTTCAAACTCAGGCGAAGATTGTTCTGTTTATTTACTTCTTCTGGTGGCCAATTGTTGAATCTCAAGTATCTAATCCTCTACCAAGACCTGCAAGGGCTCTCGATGCGACATTACAGGACTATGCATTTCGTGCATTCATTCGTCCACGCACTGGTGTTCCCTTTGATGGTATTGTACCACCATATTTGACCGGAATTGAGATATCGGCAATGCGGCTCAGAAGTGGTAGTTTGTATCGTAGAGGCGTTCCAACCTTTAAGGAGTTCACACTTCCGGTAGGGTTAAGAGAGCAGCCGTATGTTGAGAGACTGGTTCTGGTTTATCAAAACTTAGGAAATTGGTCCACAACCTATTACTCTTTACCTGGTTACATTTATCTAGCTCCCATATTAGGTCTTCTTGCTTACAATGGTTCGGATTTGACAGCTTCTAATATACCAGAACTTGATTTGTGGGCTTCTGAGGAAGCCATTAGAATCAATTTTGGAAGAATTAGCCCCATACCAGTTGGTTTAGTTGCAAAGTGTGCTTGGTTTGATCTACATGGTCAGGTGAATTTCACAAATTTGTTATCTGGGAATGTATGTTCCACCACTGAACAGGGGCATTTCTCAATTGTAGCCGAATCAGCTGTCCCTCCTGCTCCGGTACCTCCTGCACCATCTGAACCTGAACCTGCACCGTCTGAACCTACACCTAGTGGTAGAAAGAAAAATGAGTCTAAGATTTGGGGAATAATTGGGGCGGTAACTGGTGGAACCGCTTTGTTGGTGCTATTGACATTGTTGATATTGTGGGCATGGCGGTACAAAAAGAGAAAACGAATTCGTGAATTAGAACGGGCTGCAGATGCTGGTGAAGCGTTGAGGATGACCAGAATTGGGAGCATGAGAGCGCCATTTGCATTGGGTACAAGAACAATGCCGAATTTTGAAAGCGATTTTGGTGTTTGA 972 43.72 MHMSLQFQTQAKIVLFIYFFWWPIVESQVSNPLPRPARALDATLQDYAFRAFIRPRTGVPFDGIVPPYLTGIEISAMRLRSGSLYRRGVPTFKEFTLPVGLREQPYVERLVLVYQNLGNWSTTYYSLPGYIYLAPILGLLAYNGSDLTASNIPELDLWASEEAIRINFGRISPIPVGLVAKCAWFDLHGQVNFTNLLSGNVCSTTEQGHFSIVAESAVPPAPVPPAPSEPEPAPSEPTPSGRKKNESKIWGIIGAVTGGTALLVLLTLLILWAWRYKKRKRIRELERAADAGEALRMTRIGSMRAPFALGTRTMPNFESDFGV* 324
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Taer4g02320 323 Pfam Protein of unknown function (DUF1191) 37 214 IPR010605 -
Taer4g02320 323 PANTHER PROTEIN, PUTATIVE (DUF1191)-RELATED 17 321 IPR010605 GO:0016020(PANTHER)
Taer4g02320 323 MobiDBLite consensus disorder prediction 220 244 - -
Taer4g02320 323 MobiDBLite consensus disorder prediction 220 237 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Taer4g02320 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
162652 Taer4g02320 Taer9g01333
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
5254775 Taer Taer4g02320 Taer-Chr4:53093519 Taer9g01753 Taer-Chr9:12922515
5269847 Taer Taer1g04295 Taer-Chr1:41977859 Taer4g02320 Taer-Chr4:53093519
5271560 Taer Taer3g02465 Taer-Chr3:75535597 Taer4g02320 Taer-Chr4:53093519
5289731 Taer Taer4g02320 Taer-Chr4:53093519 Taer9g01333 Taer-Chr9:9394918