AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Taer4g02324 ATGGACATTGAAAACAAAGACGAACAACCTCTCAGATCCGTTCCCGTTTCTGATCCCGATTCATCCCGTAAACACAAACGCAAACGATGCATAATCATTTGTTCTTCAATATCAACATTCATCTTCCTCATTGCAATAATCTTACTCATATTAGCACTCACTGTATTCAAAGCCAAAAAGCCGGATCTAAACGTAAACTCGGTAACGTTACAAGACCTAAACGTCAATATCAATCCTCTTCCTGTTCAGGTTACGTTAAACCTTTCACTCGCTATTGGCATATCGATAAAAAATCCTAACAAAGTGAGTATAAAGTACCGTACCAGTTCTGCTGCGTTACGCTACAAAGGAAATGAGATCGGTAACGTACCGATACCTGCGGGGAAACTTGGTTCTGATAAAACGACTGATTTGAATTTGACGGTGACGGTTTTTGCTGATCGAGTTGCTTCTAATTCTGAGATGTTTATGGATGTTGTTAGAGGTAATTTGCCGATAACAACTTATACGAGAATTAAAGCCAAAGTTCGAGTTTTGTTTATTAATATTCATGTTACGTCTACGTCGACTTGTGATGTCAATGTTGATGTGCAAAATAGAAGGATTGCGAATCAAACTTGCAATTATGAGAACAAGTTTTAG 642 38.01 MDIENKDEQPLRSVPVSDPDSSRKHKRKRCIIICSSISTFIFLIAIILLILALTVFKAKKPDLNVNSVTLQDLNVNINPLPVQVTLNLSLAIGISIKNPNKVSIKYRTSSAALRYKGNEIGNVPIPAGKLGSDKTTDLNLTVTVFADRVASNSEMFMDVVRGNLPITTYTRIKAKVRVLFINIHVTSTSTCDVNVDVQNRRIANQTCNYENKF* 214
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Taer4g02324 213 Pfam Late embryogenesis abundant protein 94 188 IPR004864 -
Taer4g02324 213 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 18 204 - -
Taer4g02324 213 SUPERFAMILY LEA14-like 43 153 - -
Taer4g02324 213 Gene3D - 47 203 - -
Taer4g02324 213 MobiDBLite consensus disorder prediction 1 22 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Taer4g02324 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
162654 Taer4g02324 Taer9g01344
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
5288686 Taer Taer4g00804 Taer-Chr4:6090610 Taer4g02324 Taer-Chr4:53174998
5289733 Taer Taer4g02324 Taer-Chr4:53174998 Taer9g01344 Taer-Chr9:9459944