AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Taer4g02337 ATGGTCCCATCCAACTTAAAGCCGATGATGCTTCAGTTGTGGGCCAAGATCGAAACCTCACTCATACGCGTTTGCATCTTACTATATCAACACGCACACAAATTGATTCATCTTTGTTCGCAGTATCAAACAAACACTCCATTAGATCTGTTCTTACTTCTTACTGGTTGTTGCGCGCTAACAATGGCGCTTCAACGCCACATCTTCTTAACCTACTACTTCGTTTTCATCGTCTTCACTATCCACACGTCTAAACTCGTTTCCGCCGATGCGATCCAAGGTTGCGGTGGTTTTGTCGAGGCGAGTACATCTTTGATCAAGTCAAGGAAGCCAACTGATTCGAAATTGGACTATTCGCATATCACGGTTGAGCTGCGTACTTTGGATGGCTTGGTAAAGGATCGAACACAATGTGCTCCGAATGGTTACTACTTCATCCCTGTTTATGATAAGGGGTCTTTTGTTATTAAAATTAAAGGACCGGAAGGATGGTCATGGAACCCAGATCAGGTTCCTGTGCTTGTCGATCATACTGGCTGTAATGGCAACGAAGATATAAATTTTCGGTTTACAGGGTTCAGTATTAGTGGAAAAGTGGTGGGAGCAGTTGGTGGTGCAAGTTGTCCATCTACAGATGGTGGTCCATCAAATGTAAATGTTGAGCTTTTGAGTTCCAATGGGGATGTTGTATCTTTTGTTTCTACATCAGCAGCTGGACGTTACTCTTTTACCAATATTATTCCAGGTCGATATAACCTAAGGGCATTCCATGATGACTTAAATATTAAAGTTAAAGGTTCAACAGAGGTTGAATTAGGATTTGGGAATAGCCAAGTACATGATGTCTTTTTTGTCTCTGGTTATGATATTCGTGGATCAGTAGTTGCACAGGGAAACCCTATTTTGGGGGTTCACTTTTATCTGTACTCTGACGATGTTACTCAAGTGGACTGTCCACAGGGTTCTGGTAACCCATTTGGAGATAGAACTGCTCTCTGTCATGCAATATCTGATGTTGATGGAAAATTTAATTTTAAGTCAATTCCATGCGGTGTTTATGAGCTTGTACCTTACTATAAGGGCGAGAATACAGTTTTTGATGTATCCCCTCCCTCTGTCACTGTGACTGTTCAGCATGATCATGCAGCAGTATCTGAAATGTTTAAGGTTACTGGGTTTTCTGTTGGGGGTCGTGTTGTTGATTCTGATGGCAAGGGAGTTGATGGTGTAAAAGTCGTGGTGGATGGCATTGAGAGGTCCATCACTGATAAAGAAGGATATTATAAGCTCGACCAAGTTACATCTAAACAGTATCTGATTGAAGCGAAAAAAGAGCACTACAAGTTTGACAAATTGACTAACTTCATGGTTTTACCTAATATGGCATCTGTTGCTGATATCAAAGCAGTGTCATATGATGTTTGTGGCTCAGTGCAGACAGTTGATTCTGGTTACAAAGCAAAAGTGGCTCTGACTCATGGACCACAGAATGTTAAGCCACAAATGAAGCAAACTGATAATAAAGGCTATTTCTGCTTTGAGGTTCCCCCTGGTGACTATCGGTTATCGGCTATTGCAGCCACACCTGAAACTACCCCACATCTTTTATTTTCACCCCCGCATATTGATGTAAATGTCAATGGTCCATTGCTGTCACTGAATTTTTATCAGGCACAAGTTAATGTAGGTGGCTCGGTAACCTGCAAAGAAAAATGTGATTCATCTGTTTCTGTTGATCTTGTGAGATCGGATGCTAAAAGCAATGAAGAAAGGCAAACAGTTGGTTTGACTGACCATAATGAATTTTTATTTCAAAATGTTCTACCTGGAAAATATAAACTTGAGGTCAAACACCTTTCTAAAGGAGCTATACCTGGAGAAGATAGTTGGTGTTGGGAACAGAGCTCCATACTTCTTGATGTCGGAACAGAAGATGTTAAAGGGGTTAACTTTGTTCAGAAAGGTTATTGGGTTAACTTAGTTTCCACTCATGATGTAGATGCATATCTGCATCAATCATATGGTTCCCGTGTGAATCTAAAAATCAAGAAAGGTCCTCAGCACATATGCATTGAATCTCCTGGAGTGCATGAACTCCATTTTGTAAACTCTTGTGTTCTTTTTGGGAGCTCACCTGTGAAAATTGACACCACCAGCACATTGCCTATCTATCTAAAAGGAGAGAAGTATCTAGTCAAAGGAGAAATTAAGGTTGAATTGAGCTCACAAAATGATGCTGACCGATTACCTAAAAACCTAGTGGTTGACATTTTAAATGATGAAGGAAAAGTTATTGAAGGAAGTACTGCTAAATTTGTCGTCAGTGAGAATGAACAATCAAATACAGCTCTTTATGAGTATGAAATATGGGCAAATCCTGGAGAAAAACTTACATTTGAACCTCAGGATATTCGGAATGAAAATGAAAAAAAGATTCTATTTTATCCTCGAGAACATCAGGTCAAAGTGGCACAAGATGGCTGTCAGGTTTCAGTTCCTCCGTTTTCTGGGCGATTTGGGCTGTACATTGAAGGATCAGTCTCTCCCCCACTTCCAGATGTTAATATTAGAATCATAGCTTCTGGAGATAGTCAAAATGCCCGAATCAAGAAAAATGAATTGGCATATGAGACAACGACAACCGCAGATGGCTCGTTTATCGCTGGACCCCTATATGATGACGTCACTTACTATACCCAAGCTTCAAAGCCTGGTTATCATGTAAAGAAAATTGGACCCAATTCCTTTTCGTGTCAAAAGCTTGGTCAAATCTCTGTTCGTATACATTCTAGAGAAGATGCTGATGAATTATTTCCCTCGGTATTGCTATCATTAAGCGGGGAAGATGGTTATAGAAATAACTCGATATCTGCTACGGGTGGAGCTTTTGTATTTGATAATTTATTTCCTGGAAGTTTTTATCTCCGTCCTCTCTTGAAGGAGTATGCTTTCTCTCCATCAGCACAAGCAGTTGAACTTGGGTCTGGGGAGTCCACTGAAGTTGTCTTCCAAGCTAGACGTGTTGCTTACAGTGCCATGGGTGTGGTTACTCTGTTATCTGGTCTACCAAAAGAAGGTGTTCCAGTCGAGGCCCGCTCTGACACAAAAGGTTATTATGAAGAAACTGTCACAGATTCATCAGGAAACTATCGCCTAAGGGGACTTCACCCTGATACTAGTTACACAATCAAAGTCGGAAAAATAAATGGACTTGGCACCTCTAACATCGAACGGGCTTCCCCAGAATCTGTTGGAGTCAAGGTTGGTTATGAAGATATCAGGGGACTAGACTTTTTGGTTTTTGAGCAACCGGAAACAACTTTATTAACTGGCATGGTTCGTGGAAGCAGAAATAAAGAGGTGCATGAAAATCTACAGTTGGAAATTAGATCAGCTAGTGATCCGTCCAATATTGAATCATTGTCACCTTTGCCAATTTCAAGTTTTTTCCACATTAAGGGCCTGCCTAGAGGTAAACATCTTCTGCAGCTTCGGTCTACTAAAACACCGCGTGCCCTCAGATTTGAATCTGATGTGGTTGAGGTTGATTTGGAGAAAAATACCCAAGTTGATGTGGGTTTATTGTTTTACAAAGTTGAAGATGATCACCATAAACAGGAATTGACTCCAGCACCTGTGTATCCACTCATTATTGGAGTATCAGTGATTGCATTATTTATTAGCATGCCAAGATTGAAAGACATGTACCAAAGCAATGTAGGAGTACTGGTACCGGGACCCAGTGCATCGACGAAGAAAACAGTGAGAAAAAAGACTTACTAA 3783 40.73 MVPSNLKPMMLQLWAKIETSLIRVCILLYQHAHKLIHLCSQYQTNTPLDLFLLLTGCCALTMALQRHIFLTYYFVFIVFTIHTSKLVSADAIQGCGGFVEASTSLIKSRKPTDSKLDYSHITVELRTLDGLVKDRTQCAPNGYYFIPVYDKGSFVIKIKGPEGWSWNPDQVPVLVDHTGCNGNEDINFRFTGFSISGKVVGAVGGASCPSTDGGPSNVNVELLSSNGDVVSFVSTSAAGRYSFTNIIPGRYNLRAFHDDLNIKVKGSTEVELGFGNSQVHDVFFVSGYDIRGSVVAQGNPILGVHFYLYSDDVTQVDCPQGSGNPFGDRTALCHAISDVDGKFNFKSIPCGVYELVPYYKGENTVFDVSPPSVTVTVQHDHAAVSEMFKVTGFSVGGRVVDSDGKGVDGVKVVVDGIERSITDKEGYYKLDQVTSKQYLIEAKKEHYKFDKLTNFMVLPNMASVADIKAVSYDVCGSVQTVDSGYKAKVALTHGPQNVKPQMKQTDNKGYFCFEVPPGDYRLSAIAATPETTPHLLFSPPHIDVNVNGPLLSLNFYQAQVNVGGSVTCKEKCDSSVSVDLVRSDAKSNEERQTVGLTDHNEFLFQNVLPGKYKLEVKHLSKGAIPGEDSWCWEQSSILLDVGTEDVKGVNFVQKGYWVNLVSTHDVDAYLHQSYGSRVNLKIKKGPQHICIESPGVHELHFVNSCVLFGSSPVKIDTTSTLPIYLKGEKYLVKGEIKVELSSQNDADRLPKNLVVDILNDEGKVIEGSTAKFVVSENEQSNTALYEYEIWANPGEKLTFEPQDIRNENEKKILFYPREHQVKVAQDGCQVSVPPFSGRFGLYIEGSVSPPLPDVNIRIIASGDSQNARIKKNELAYETTTTADGSFIAGPLYDDVTYYTQASKPGYHVKKIGPNSFSCQKLGQISVRIHSREDADELFPSVLLSLSGEDGYRNNSISATGGAFVFDNLFPGSFYLRPLLKEYAFSPSAQAVELGSGESTEVVFQARRVAYSAMGVVTLLSGLPKEGVPVEARSDTKGYYEETVTDSSGNYRLRGLHPDTSYTIKVGKINGLGTSNIERASPESVGVKVGYEDIRGLDFLVFEQPETTLLTGMVRGSRNKEVHENLQLEIRSASDPSNIESLSPLPISSFFHIKGLPRGKHLLQLRSTKTPRALRFESDVVEVDLEKNTQVDVGLLFYKVEDDHHKQELTPAPVYPLIIGVSVIALFISMPRLKDMYQSNVGVLVPGPSASTKKTVRKKTY* 1261
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Taer4g02337 1260 SUPERFAMILY Carboxypeptidase regulatory domain-like 394 488 IPR008969 -
Taer4g02337 1260 Gene3D - 193 282 - -
Taer4g02337 1260 Pfam BOS complex subunit NOMO1-like, beta sandwich domain 840 912 IPR055073 -
Taer4g02337 1260 Pfam BOS complex subunit NOMO1-like, first beta sandwich domain 112 188 IPR055075 -
Taer4g02337 1260 SUPERFAMILY Cna protein B-type domain 1014 1075 - -
Taer4g02337 1260 Pfam Carboxypeptidase regulatory-like domain 394 467 - -
Taer4g02337 1260 SUPERFAMILY Hypothetical protein PA1324 181 259 - -
Taer4g02337 1260 Gene3D - 395 478 - -
Taer4g02337 1260 PANTHER CARBOXYPEPTIDASE REGULATORY REGION-CONTAINING 91 1238 IPR051417 GO:0005789(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Taer4g02337 K26500 BOS complex subunit NOMO
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
5254787 Taer Taer4g02337 Taer-Chr4:53362344 Taer7g03591 Taer-Chr7:42522994