AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Taer4g02339 ATGAAGTTTTATAATCACATTCTTCTTATAATCTCCGTTGTTTCTCTCTTTTTCATTGTCTTAGCAAAAGGCACGGATAACTCACCATCCTCGTCGAAAGAAGAGGAGATATACGATGAAGTTAAACAGGCGTTTGGCCCGGCATTTAACAATGCCAAAGAGAAATTTGGTCCTATTTCATCATTAGATTTCGAGCAATATGAAGAGGCTAAAGATGCTTTTGGCCCAATTCCATCATTTGATGAAGCTAAAGAGGCTTTAGGCCCGGCCGCATCCCCCATCCTAGAGAAAGCAAGAGAGGCATTGGGCCCAATTTCACCTGCTGCTATAGAAGATGCAAAAGAGGCTCTAGGCCCTGCGTCATCTAAAGCAAAGGAGACCTTAGGTCCTGCCTCAGCTAGTGTCATAGACAAAGCCCGAGAAAAACTTGACTCGATCACATCTTGGATTACTCAAAACAAAGAGGAGACATCTTTGGAAGGTAAAGGTACACTCCCGCCATCCGAGGCACCAAGCCCAATTGTATCACCTTTCGACCCATATGGACTCTTAGACGGTGCTAAAGAAAACTTTAATTCACTTTTAGACTCCATAACTAAAGAGAAAGAACAAATATCATCTTCACTGTCAGATGACGCACAAAAGAAATCCGGCCCGGTTTCTTCCATAGATATTGATAAAGCAAAAGAGAACGAAGCACGAAAGTCACTGAGCCCAATTTCTAATGTGATTACACCAAGCCCGGCTTCATCTTCATCTCCTGAAGGTTCAGATCTTTCTAAAGCCTTAGATGAGGCTAAAGAAAAATCTGAGTCACCCTCCAATTTAACCAAATCCCGAAAAGAACTACGCGATGATGATCCATCCGGCTCAAGCACAGTGTCTGCCCCCGCCCCGGCTCCTATTTTGCCTTCAACTTTTAAGGAAGCCATGGATGTTGCTAAAGAAAAATTTAGCTCACTTACATCATATTTATCTCAAAACAAAGTTCAAATATCAGCGGAACCAGAAACGAAGCCCCGTTCGAATTCTGCATTCTTTGACCATGATTCTGCTTTGGCTATAGAGTCAATGATTAAGCAAGCACAATCAAATTCACAGTTAGCTATCGACGAGGCTAAAACGCTCTTGAGTGATCCTATAGATTCATCAGATAGCGGAAACTGTGTGCAGAAATGTATGACTAGTTATGAATCCTGCAGTCAGAAACTGAAGCGCGCAATGGAAGATCTTAAGGCTAGAAATGTGGAACTGCTTAAAACTGATATTGGTGCAGTTGAAGGAGAAATAAATGTGTGTCAAAAGTGCTTTCAAGAAAATACAAAAACGCAGTCTCCGTTTAGTGATTTGGAGGAGGCTACAATCAAGGCTACTCGCGAATGCTTAAACGTTTTAGACCATTCTGGTTGA 1410 41.99 MKFYNHILLIISVVSLFFIVLAKGTDNSPSSSKEEEIYDEVKQAFGPAFNNAKEKFGPISSLDFEQYEEAKDAFGPIPSFDEAKEALGPAASPILEKAREALGPISPAAIEDAKEALGPASSKAKETLGPASASVIDKAREKLDSITSWITQNKEETSLEGKGTLPPSEAPSPIVSPFDPYGLLDGAKENFNSLLDSITKEKEQISSSLSDDAQKKSGPVSSIDIDKAKENEARKSLSPISNVITPSPASSSSPEGSDLSKALDEAKEKSESPSNLTKSRKELRDDDPSGSSTVSAPAPAPILPSTFKEAMDVAKEKFSSLTSYLSQNKVQISAEPETKPRSNSAFFDHDSALAIESMIKQAQSNSQLAIDEAKTLLSDPIDSSDSGNCVQKCMTSYESCSQKLKRAMEDLKARNVELLKTDIGAVEGEINVCQKCFQENTKTQSPFSDLEEATIKATRECLNVLDHSG* 470
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Taer4g02339 469 MobiDBLite consensus disorder prediction 149 182 - -
Taer4g02339 469 MobiDBLite consensus disorder prediction 235 258 - -
Taer4g02339 469 Gene3D Invertase-pectin methylesterase inhibitor family protein 318 467 IPR035513 -
Taer4g02339 469 SUPERFAMILY Plant invertase-pectin methylesterase inhibitor 355 463 IPR035513 -
Taer4g02339 469 Coils Coil 401 421 - -
Taer4g02339 469 MobiDBLite consensus disorder prediction 201 302 - -
Taer4g02339 469 MobiDBLite consensus disorder prediction 201 217 - -
Taer4g02339 469 MobiDBLite consensus disorder prediction 260 288 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Taer4g02339 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
162656 Taer4g02339 Taer9g01389
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
5254789 Taer Taer4g02339 Taer-Chr4:53379495 Taer9g01389 Taer-Chr9:9847624