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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Taer4g02361 ATGGACGGAACTTATAACCGCCCAACCAATTTCCACGACCGGAGATTGGAGATTGTGAGTGGCAAAAGTAACCAAATTTACGCCGCCACCGGTGTTACATCACCGGAGTTTTTCCCGGCGAGAGTTTCAACGTCATCGGCGAAGCCGTGGGGTGGATTTAGTGACCCGGAGAGTAAACGGAAGAAGAGGATCGCGAAGTATAAAGTTTATACGATTGAAGGGAGAGTGAAAGCTTCGTTTAGAAATGGGATTAGATGGATCAAAACTAAATGCTCTGAGTTCATCCATGGGTATTGA 297 46.46 MDGTYNRPTNFHDRRLEIVSGKSNQIYAATGVTSPEFFPARVSTSSAKPWGGFSDPESKRKKRIAKYKVYTIEGRVKASFRNGIRWIKTKCSEFIHGY* 99
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Taer4g02361 98 Pfam Domain of unknown function (DUF3511) 53 97 IPR021899 -
Taer4g02361 98 PANTHER DOMAIN PROTEIN, PUTATIVE (DUF3511)-RELATED 38 97 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Taer4g02361 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
5254805 Taer Taer4g02361 Taer-Chr4:53681405 Taer7g02019 Taer-Chr7:13565676
5272122 Taer Taer4g02361 Taer-Chr4:53681405 Taer7g00389 Taer-Chr7:2472794