AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Taer4g02368 ATGATCTCTTATAACAACAAGATGTACAAAGGAGTAAAAAGATACTGGCGGAGGAGAGGCTACCGTCGCCTCTCCCCCGCCACAGCCACGACCAATGAACTCCGGTCATCAAACCGGAAAACCTGGTCGTGGAAGATACGTATGCCACGGAGACTGAAGATAAAGTTGAGGTTTAAGTTTAACCCCAAGAAGTTTATTGCAAGGGTTCAAGATGCTTATGTTAGAATGATGATGAGGGTAGCGAATTTGCCGGCGGTGAGCAGCGGAGCGATAGCGGGGTATGGGGGAGGAGATATAGGTCAGTTTGGGATGAGAGCTGTGAAGGAGTATGATGAGAAGATGATCATTCAGATGTATAACTCGTTGGTGATGAGGCAGCCTCATTTGATGGCACTTGATGTTGAACCACCACTTGTGTGGTCTCGGTAA 429 47.55 MISYNNKMYKGVKRYWRRRGYRRLSPATATTNELRSSNRKTWSWKIRMPRRLKIKLRFKFNPKKFIARVQDAYVRMMMRVANLPAVSSGAIAGYGGGDIGQFGMRAVKEYDEKMIIQMYNSLVMRQPHLMALDVEPPLVWSR* 143
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Taer4g02368 142 PANTHER BNAA09G40010D PROTEIN 6 125 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Taer4g02368 - -
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
5243859 Taer Taer11g02798 Taer-Chr11:38345080 Taer4g02368 Taer-Chr4:53798719
5288677 Taer Taer4g00793 Taer-Chr4:6005508 Taer4g02368 Taer-Chr4:53798719
5289031 Taer Taer4g02368 Taer-Chr4:53798719 Taer6g00772 Taer-Chr6:5229015