AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Taer4g02382 ATGTCTTCACTACAAACCCTAACCCTAATCACCATCTTCATCATATCATCGTCATCATCATCATCTCTTCCGATCATCAATTCCACCACACCAACAGCTTACGAAGCTCTCGAATCATACGGTTTCCCCTCCGGCCTACTCCCCGTCGGCGTCACCGGCTACACACTCGACGAACAAACCGGTCAATTCGAAGCGTATTTAAGTCAAACATGTTCTTACACCGTCCAAGGCTACAATTTGAAGTACCAGTCGACAATTAGCGGTGTGATTAGTAAAGATACGCTCACTAATTTGAAAGGGGTTAGTGTAAAAGTGCTGTTTTTTTGGTTGGATATTGTGGAGGTGAGTCGTGATGGTAATGAGTTGTATCTTTCAGTGGGGATATTGTCGGCTGCGTTTGACATCACTGGGTTTATTGAGTCGCCGCAGTGTGGATGTGGGTTTGATTGCAACGATTTGGATTTGGATTTGGATTTGGATTTGGATTTGGATTTGGATTTGAATTTGAATTTGCGATCTGCGTTGTGA 528 43.75 MSSLQTLTLITIFIISSSSSSSLPIINSTTPTAYEALESYGFPSGLLPVGVTGYTLDEQTGQFEAYLSQTCSYTVQGYNLKYQSTISGVISKDTLTNLKGVSVKVLFFWLDIVEVSRDGNELYLSVGILSAAFDITGFIESPQCGCGFDCNDLDLDLDLDLDLDLDLNLNLRSAL* 176
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Taer4g02382 175 SUPERFAMILY At5g01610-like 8 150 IPR036758 -
Taer4g02382 175 Gene3D - 21 141 IPR036758 -
Taer4g02382 175 PANTHER T31J12.3 PROTEIN-RELATED 20 145 IPR007493 -
Taer4g02382 175 Pfam Protein of unknown function, DUF538 33 138 IPR007493 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Taer4g02382 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
162658 Taer4g02382 Taer9g01410
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
5254820 Taer Taer4g02382 Taer-Chr4:53988370 Taer6g03199 Taer-Chr6:36282695
5289034 Taer Taer4g02382 Taer-Chr4:53988370 Taer6g00786 Taer-Chr6:5362470
5289714 Taer Taer4g02382 Taer-Chr4:53988370 Taer9g01410 Taer-Chr9:10040849