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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Taer4g02388 ATGGATGCAGATTGGTATCGCGATGTTCCCTGTTCTTCGATCGCCGTTGAATCCATCATTAGCGTTGGAACTGGCGGGTTGATCTGGGGTGCGTGTGCTGGTTCCTACGATGCCAAACAAAAAGGGCTGACCGGTATTTCACGTGCTTCTTTCATGGCCAAGACCGTTGGTAAATATGGGTTTCAATGTGGACTCTTTGCTGGAATTTTTTCGTTTACGCGCTGTGGGATTCAAAGATACCGCAGGAAAAGTGATTGGGTGAATGCGCTAGTTGCGGGTGGGGTTGCAGGTGCAGCCATTGGTGCTGGAACCCGAAACTGGAAGCAGGTTGCAGCCATGACTGCTTTTCTTTCTGGATTTTGTGCCATTGCAGATCAATCAAGAGCAATGTGA 393 49.11 MDADWYRDVPCSSIAVESIISVGTGGLIWGACAGSYDAKQKGLTGISRASFMAKTVGKYGFQCGLFAGIFSFTRCGIQRYRRKSDWVNALVAGGVAGAAIGAGTRNWKQVAAMTAFLSGFCAIADQSRAM* 131
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Taer4g02388 130 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 32 - -
Taer4g02388 130 Pfam Tim17-Tim22-Tim23-Pmp24 family 16 118 - -
Taer4g02388 130 PANTHER MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22 13 126 IPR039175 GO:0008320(PANTHER)|GO:0030943(PANTHER)|GO:0042721(PANTHER)|GO:0042721(InterPro)|GO:0045039(InterPro)|GO:0045039(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Taer4g02388 - -