AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Taer4g02414 ATGGCAACAACAGTGGTGGTGGTGGTGACGGGTTATGGTGTGAGCACTAAGCAGGTGGTGGTGATCGGAGGTGGTAATGGTGACAGATATATGGGTCAGTCGTCTCAACTCAACTCAACTCAACTCTTTTTATTATTTCAAATACCCGACACTTTAATTTCTTCAATCGCAAACTCCTCAACAACGCTGCTTGCTACAACAAAGATGGTTAAAGATATCGACGATGGTGATAAACGCGTTGAGTGGCTTCAATCTGAACACTACTCTGCTGGTGGTAGCATTTTTGGAGAGCCACAAAAGACAACACGGGTCGGGGATGAGTACCAGGCGAAAATCCCATCTTTGATGACAAAAGACGAACGATTTCAACTCATAAAGTCACCTGCTTGTGACGATGCCAAGATTGGTGATCGAAAGAAATTTGAGTTTGGTTTGTCAATTCCTGTCACTTGGGTTCACAATCGACGAAAAAGTAATGAAGAAACTGCGAAGGGTAAATCTAGTAATGCAAGCTGTGGAACGGAAAATGATTTGGTTCCGGTTCCTTGTTCGTCAAGTGAAGAATCTTGGAGCGTGATTGAACACGATAGTTTTATTCTTGGTTTATATATATTTGGCAAAAATCTTCGCGTTGTGAATGAGTTCATGGGGAATAAAGGGATGTCAAATGTGATATCTTATTACTATGGGTCGTTTTATAGAAGCAACGAATACCAAAAGTGGTCAATGTATAAGAAGAAACGGATCCGTTATAAGTCCATTCCTGGAAAAAAGATTTTCAAAGGGTGGAGGCTACACGAGCTTTTGTCTCGCTTACTTTCCAACGTGACAGACAATTGTAAAGCGAGTTTGACGCAGGTAATTAGAATGTTTGAGGAGGGTAAACTTTCATTTGTGAAGTATGTGTTCACTTTAAGGGATATAATGGGCGTCGATCTTCTTGTACAAGCCGTAGCTATTGGAAAAGGAAAACAGGACCTTACTAGCAAGACCAAAACGCGCTTACGAAGCAAAAAGGTTGAGTCAACATGTTCCTCACTTAAAACGGAAGAGATTGTTAACATCTTAAAGGATCGAATTGGATTAAGCAAAGCACGGTTAAATGAGTTCTTCTGGACCGCTGTGTGGCCTCGTCTTTTAGCGCGAGGATGGCATTCTGAACAGCCTAGAAACTATGCTGTCCAAAACTCGAAAAATTTCGTGTTTCTTGCACCTGGTGTAACAAAGTTTTCAAGGAGGAGTTTGGTCAAAGGAAGTCAATATTTTGACTCGTTGACTGAAGTCCTGAACAAAGTTGCATCTGACCCACACCTTCTTGAAAACGAACCTGAAAAGGATCGGTTAATTGAGCCATGTGAAACACAAGGCTCGGATGATGAACAAGATTTGATGAAATGCACAGTTGTGGATACGAGTATGCGTGGGCTTGTTAAATTCAAGGAGCTTACAAGTTTGACTTTTTTTGAACCTGTTGCAGAAACCGAGCATGATACAAAGCGCCAACGGGTTAACAATATTAAAAATCACAACACTAGTGGTGAAGATGAAGCAATGGAAGATAGTGTGTGTTGTGATAAGAAGCGTACAAGGATAGTGATCGACTTGAACAGCCCTCGAGTGGGTCCAGGCTCAGACGACAGCAACAAATTATCAGCTGCTAAAAAACCCGTTTTATCTGTAAAAACTACCAACCAAACTGATGTGTTGACCACGCTTGCTAACGGTCAACGACAATGTAGAAGAAACCGTGCATTGACCCCAAAAGCATTGGAAGCTCTTGCAAATGGATTCATGAACCCGAAAAAGAAGAGGGGCGGGGGCGGGGGCGGGCCAGAGGATGGGACCCGTAGGCGTGTTCGTGCTAAAACAGCTAGTGTCTCGAGTTGCGGTGCGCGTTACTTAGTGGATGGAGTCTTTGATGGTTCTTCTTCCCATATGGTCACCCAGTCTCCAAAATGA 1959 42.83 MATTVVVVVTGYGVSTKQVVVIGGGNGDRYMGQSSQLNSTQLFLLFQIPDTLISSIANSSTTLLATTKMVKDIDDGDKRVEWLQSEHYSAGGSIFGEPQKTTRVGDEYQAKIPSLMTKDERFQLIKSPACDDAKIGDRKKFEFGLSIPVTWVHNRRKSNEETAKGKSSNASCGTENDLVPVPCSSSEESWSVIEHDSFILGLYIFGKNLRVVNEFMGNKGMSNVISYYYGSFYRSNEYQKWSMYKKKRIRYKSIPGKKIFKGWRLHELLSRLLSNVTDNCKASLTQVIRMFEEGKLSFVKYVFTLRDIMGVDLLVQAVAIGKGKQDLTSKTKTRLRSKKVESTCSSLKTEEIVNILKDRIGLSKARLNEFFWTAVWPRLLARGWHSEQPRNYAVQNSKNFVFLAPGVTKFSRRSLVKGSQYFDSLTEVLNKVASDPHLLENEPEKDRLIEPCETQGSDDEQDLMKCTVVDTSMRGLVKFKELTSLTFFEPVAETEHDTKRQRVNNIKNHNTSGEDEAMEDSVCCDKKRTRIVIDLNSPRVGPGSDDSNKLSAAKKPVLSVKTTNQTDVLTTLANGQRQCRRNRALTPKALEALANGFMNPKKKRGGGGGGPEDGTRRRVRAKTASVSSCGARYLVDGVFDGSSSHMVTQSPK* 653
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Taer4g02414 652 SUPERFAMILY Homeodomain-like 188 239 IPR009057 -
Taer4g02414 652 PANTHER ATROPHIN-RELATED 85 505 - GO:0003714(PANTHER)|GO:0005634(PANTHER)
Taer4g02414 652 MobiDBLite consensus disorder prediction 606 620 - -
Taer4g02414 652 MobiDBLite consensus disorder prediction 595 623 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Taer4g02414 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Taer Taer-Chr4:54360652 Taer7g01288 Taer-Chr7:8530366 dispersed
Taer Taer-Chr4:54360652 Taer3g02687 Taer-Chr3:77115749 transposed