AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Taer4g02436 | ATGAGTCTTATAGAGTCAAGTTATGGTCTATTGACAACAGAACCAGAAACAGATTATGTGCACCACATAGCATTATTTGCAGCACTTCTTTGTGCCTGCATTGTAATTGGTCATCTACTTGAAGAAAGTAGATGGATGAATGAATCGATCACAGCTCTTGCAATTGGTTTAGGCACAGGATTTATCATTTTACTAACTTCTCGCGGTACAAACTCGCACGTATTGGAATTTAAGCAGGAGTTTTTCTTTATATATCTTCTTCCACCTATTATATTCAATGCTGGGTTTCAGGTAAAAAAGAAACGATTTTTCCAAAATTTCACAACTATTACCTTATTTGGAGCTATCGGTACATTGATATCCTTTGCCATTATATCATTCGGTGCAACACGCCTGTTTCCTAAACTAGGCATCAGCTATCTTGTAATGAAGGATTATCTTGCACTTGGAGCCATATTTTCTGCAACAGATTCTGTTTGCACCTTGCAGGTTCTTAATCAGGAGGAAACACCATTGTTATACAGTTTAGTGTTTGGGGAAGGCGTGGTTAATGATGCCACATCTGTTGTCCTTTTCAACGCACTTACAAAATTTGATCTATCAGACATGAACACTTTCGTCGCGCTTAAATTTGCTGGAAATTTCTTGTCACTATTCGTATTAAGTACTTTTTTGGGAGTCTTGGTTGGGTTGCTTTGTTCATTCATCATCCGAACACTCTATTTTGGAAGGGATTCAACAGATCGTGAAGTCTCTCTTATGATACTCATGGCTTATCTTTCATATGTTTTAGCTGAAGTTTTTGGATTAAGTGGAATCCTTACTGTATTCTTTTGCGGTATTGTAATGTCACACTATGCTTGGCATAATGTCACCATCAACTCACAAGTAACTACAAAACATGCTTTTGCAACAATGTCATTTATTGCTGAAATCTTCATCTTCATGTATGTTGGTATGGATGCACTGGATGTTGAAAAATGGAAATTTGTCAAAGACAGTCCTACAAAATCTTTTGGGGCAAGTGCTTTACTGCTTGGACTGATTATGGTTGGAAGAGCATGTTTTGTGTTCCCTATTTCAATTGTATCCAACTTAATGACAAAGCCTGCGAACAACAAGATCGAGTTTAAACAGCAGGTCACAGTATGGTGGGCTGGTCTAATGCGAGGCGCTGTATCCGTGGCACTTGCTTATAAAAAGTTTACTGGGTCTGATGAACAACATATGGAGCCAGCAAATGCACTTTTGACCACCAGCACCATTATTATAGTTCTATTTACCACCGTGGTGTTTGGATTGCTGACTAAGCCTATTATAAACTTTTTGTTTCCTAAATCTTCGCATGTTGACCACACGCAATCGTCAAGTCCAAAGTCAATCATGATGCCACTTCTCGGGCATAGACTTGACGTAGAACCTGAAACAGGAGATGATGAAACTACTTTAGAGGCTGCAACCAATCTACAAATGGTGTTTACTAATCCTGCTAACACCATTCATTATTATTGGAGGAAGTTTGATGATGCTTTCATGCGCCCGGTTTTTGGTGGAAGAGGGTTCATTTCTTATGTTACTGGTACCCGTGATGTCGCCTTAACTTGA | 1605 | 38.82 | MSLIESSYGLLTTEPETDYVHHIALFAALLCACIVIGHLLEESRWMNESITALAIGLGTGFIILLTSRGTNSHVLEFKQEFFFIYLLPPIIFNAGFQVKKKRFFQNFTTITLFGAIGTLISFAIISFGATRLFPKLGISYLVMKDYLALGAIFSATDSVCTLQVLNQEETPLLYSLVFGEGVVNDATSVVLFNALTKFDLSDMNTFVALKFAGNFLSLFVLSTFLGVLVGLLCSFIIRTLYFGRDSTDREVSLMILMAYLSYVLAEVFGLSGILTVFFCGIVMSHYAWHNVTINSQVTTKHAFATMSFIAEIFIFMYVGMDALDVEKWKFVKDSPTKSFGASALLLGLIMVGRACFVFPISIVSNLMTKPANNKIEFKQQVTVWWAGLMRGAVSVALAYKKFTGSDEQHMEPANALLTTSTIIIVLFTTVVFGLLTKPIINFLFPKSSHVDHTQSSSPKSIMMPLLGHRLDVEPETGDDETTLEAATNLQMVFTNPANTIHYYWRKFDDAFMRPVFGGRGFISYVTGTRDVALT* | 535 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Taer4g02436 | 534 | Gene3D | - | 142 | 194 | - | - | |
| Taer4g02436 | 534 | Pfam | Sodium-hydrogen exchanger family | 30 | 440 | IPR006153 | GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro) | |
| Taer4g02436 | 534 | PANTHER | SODIUM-HYDROGEN EXCHANGER | 16 | 522 | IPR018422 | GO:0005886(PANTHER)|GO:0006812(InterPro)|GO:0015385(PANTHER)|GO:0015385(InterPro)|GO:0015386(PANTHER)|GO:0016020(InterPro)|GO:0051453(PANTHER)|GO:0071805(PANTHER)|GO:0098719(PANTHER)|GO:1902600(InterPro) | |
| Taer4g02436 | 534 | NCBIfam | sodium-hydrogen exchanger 3 | 23 | 451 | IPR004709 | GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Taer4g02436 | 534 | PRINTS | Na+-H+ exchanger signature | 81 | 92 | IPR004709 | GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Taer4g02436 | 534 | PRINTS | Na+-H+ exchanger signature | 150 | 160 | IPR004709 | GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Taer4g02436 | 534 | PRINTS | Na+-H+ exchanger signature | 110 | 118 | IPR004709 | GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Taer4g02436 | 534 | PRINTS | Na+-H+ exchanger signature | 95 | 109 | IPR004709 | GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Taer4g02436 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 162664 | Taer4g02436 | Taer9g01448 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Taer | Taer-Chr3:76868515 | Taer4g02436 | Taer-Chr4:54692599 | dispersed | |
| Taer | Taer-Chr4:54692599 | Taer7g01270 | Taer-Chr7:8420219 | dispersed | |
| Taer | Taer-Chr4:54692599 | Taer9g01448 | Taer-Chr9:10314605 | wgd |
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Taer1g00363 | . | 1 | 452 | Antiporters gene family | AT3G51860 | 68.49 | 0.0 | 577.0 | |
| Taer1g00598 | . | 13 | 436 | Antiporters gene family | AT2G38170 | 59.906 | 1.77e-168 | 478.0 | |
| Taer1g00808 | . | 6 | 654 | Antiporters gene family | AT1G15460 | 65.291 | 0.0 | 911.0 | |
| Taer1g01406 | ACH,WGDA | 17 | 387 | Antiporters gene family | AT5G54800 | 76.253 | 0.0 | 554.0 | |
| Taer1g01540 | ACH,WGDA | 1 | 687 | Antiporters gene family | AT3G62270 | 75.971 | 0.0 | 1082.0 | |
| Taer1g01821 | . | 56 | 584 | Antiporters gene family | AT2G19600 | 81.869 | 0.0 | 854.0 | |
| Taer1g02612 | ACH | 4 | 619 | Antiporters gene family | AT1G15460 | 68.831 | 0.0 | 898.0 | |
| Taer1g02634 | ACH | 1 | 286 | Antiporters gene family | AT1G79900 | 63.176 | 5.89e-124 | 358.0 | |
| Taer1g02688 | . | 54 | 566 | Antiporters gene family | AT5G17860 | 43.773 | 1.43e-141 | 422.0 | |
| Taer1g02735 | . | 50 | 439 | Antiporters gene family | AT3G13320 | 73.791 | 0.0 | 595.0 | |
| Taer1g04059 | WGDA | 14 | 543 | Antiporters gene family | AT3G05030 | 75.472 | 0.0 | 825.0 | |
| Taer1g04096 | WGDA | 10 | 304 | Antiporters gene family | AT5G17400 | 36.877 | 1.60e-62 | 199.0 | |
| Taer1g04252 | . | 69 | 278 | Antiporters gene family | AT1G79900 | 33.197 | 1.89e-32 | 118.0 | |
| Taer1g04291 | . | 1 | 795 | Antiporters gene family | AT4G23700 | 64.07 | 0.0 | 1004.0 | |
| Taer1g05046 | ACH | 14 | 773 | Antiporters gene family | AT1G79400 | 38.262 | 7.49e-174 | 518.0 | |
| Taer1g05303 | . | 34 | 253 | Antiporters gene family | AT2G01980 | 71.818 | 2.24e-98 | 308.0 | |
| Taer1g05304 | . | 346 | 972 | Antiporters gene family | AT2G01980 | 56.418 | 0.0 | 689.0 | |
| Taer1g05771 | . | 47 | 237 | Antiporters gene family | AT3G19490 | 74.869 | 5.01e-86 | 264.0 | |
| Taer1g05772 | . | 262 | 576 | Antiporters gene family | AT3G19490 | 83.81 | 0.0 | 517.0 | |
| Taer1g06051 | . | 9 | 525 | Antiporters gene family | AT5G55470 | 69.632 | 0.0 | 743.0 | |
| Taer1g06365 | ACH,WGDA | 1 | 776 | Antiporters gene family | AT1G16380 | 38.804 | 0.0 | 555.0 | |
| Taer1g06719 | . | 56 | 379 | Antiporters gene family | AT3G01550 | 68.923 | 2.87e-159 | 451.0 | |
| Taer2g02860 | . | 6 | 302 | Antiporters gene family | AT5G17400 | 75.503 | 5.50e-164 | 459.0 | |
| Taer2g03016 | ACH | 1 | 687 | Antiporters gene family | AT3G62270 | 75.931 | 0.0 | 1085.0 | |
| Taer2g03269 | . | 632 | 673 | Antiporters gene family | AT1G74810 | 60.465 | 3.20e-10 | 52.8 | |
| Taer2g03270 | ACH | 10 | 578 | Antiporters gene family | AT1G15460 | 72.759 | 0.0 | 872.0 | |
| Taer2g03303 | ACH | 1 | 287 | Antiporters gene family | AT1G79900 | 69.36 | 2.15e-144 | 407.0 | |
| Taer3g00339 | . | 67 | 566 | Antiporters gene family | AT5G17860 | 47.741 | 1.30e-163 | 476.0 | |
| Taer3g02591 | WGDA | 32 | 417 | Antiporters gene family | AT5G17630 | 72.932 | 0.0 | 556.0 | |
| Taer3g02653 | WGDA | 13 | 542 | Antiporters gene family | AT3G05030 | 74.151 | 0.0 | 815.0 | |
| Taer3g02868 | . | 9 | 521 | Antiporters gene family | AT5G55470 | 68.421 | 0.0 | 724.0 | |
| Taer3g02915 | ACH | 1 | 387 | Antiporters gene family | AT5G54800 | 71.642 | 0.0 | 546.0 | |
| Taer4g00361 | ACH | 46 | 380 | Antiporters gene family | AT5G13490 | 81.25 | 0.0 | 544.0 | |
| Taer4g00534 | . | 1 | 405 | Antiporters gene family | AT5G46110 | 77.859 | 0.0 | 627.0 | |
| Taer4g00535 | . | 1 | 410 | Antiporters gene family | AT5G46110 | 78.45 | 0.0 | 634.0 | |
| Taer4g00537 | . | 1 | 410 | Antiporters gene family | AT5G46110 | 78.692 | 0.0 | 632.0 | |
| Taer4g00686 | . | 24 | 801 | Antiporters gene family | AT3G52080 | 46.105 | 0.0 | 709.0 | |
| Taer4g00913 | . | 30 | 439 | Antiporters gene family | AT2G38170 | 58.554 | 1.81e-160 | 459.0 | |
| Taer4g01510 | . | 30 | 120 | Antiporters gene family | AT5G54800 | 40.594 | 1.17e-07 | 52.4 | |
| Taer4g01613 | . | 94 | 563 | Antiporters gene family | AT5G64290 | 67.66 | 0.0 | 668.0 | |
| Taer4g01735 | ACH | 1 | 404 | Antiporters gene family | AT5G33320 | 59.512 | 1.14e-157 | 448.0 | |
| Taer4g02386 | . | 23 | 539 | Antiporters gene family | AT2G47600 | 67.37 | 0.0 | 719.0 | |
| Taer4g02436 | ACH | 27 | 534 | Antiporters gene family | AT3G05030 | 64.902 | 0.0 | 673.0 | |
| Taer5g00075 | . | 36 | 388 | Antiporters gene family | AT1G61800 | 77.285 | 0.0 | 559.0 | |
| Taer5g01232 | . | 33 | 1142 | Antiporters gene family | AT2G01980 | 63.653 | 0.0 | 1362.0 | |
| Taer5g01233 | . | 329 | 462 | Antiporters gene family | AT5G64290 | 33.582 | 7.71e-12 | 60.1 | |
| Taer5g01244 | . | 93 | 563 | Antiporters gene family | AT5G64290 | 56.237 | 3.55e-179 | 512.0 | |
| Taer5g01245 | . | 93 | 563 | Antiporters gene family | AT5G64290 | 70.488 | 0.0 | 687.0 | |
| Taer5g01247 | . | 92 | 563 | Antiporters gene family | AT5G64290 | 70.975 | 0.0 | 688.0 | |
| Taer5g01297 | . | 15 | 576 | Antiporters gene family | AT3G19490 | 78.207 | 0.0 | 819.0 | |
| Taer5g01598 | . | 149 | 444 | Antiporters gene family | AT3G05030 | 31.0 | 2.19e-25 | 108.0 | |
| Taer5g02406 | . | 1 | 384 | Antiporters gene family | AT5G13490 | 74.419 | 0.0 | 569.0 | |
| Taer6g01111 | . | 55 | 564 | Antiporters gene family | AT5G17860 | 41.503 | 7.37e-140 | 417.0 | |
| Taer6g01901 | . | 1 | 826 | Antiporters gene family | AT3G53720 | 65.942 | 0.0 | 1032.0 | |
| Taer6g02771 | WGDA | 90 | 383 | Antiporters gene family | AT5G13490 | 85.714 | 5.24e-176 | 489.0 | |
| Taer6g03040 | . | 129 | 243 | Antiporters gene family | AT2G47600 | 53.043 | 1.18e-29 | 111.0 | |
| Taer6g03249 | . | 14 | 790 | Antiporters gene family | AT1G06970 | 33.969 | 1.30e-162 | 491.0 | |
| Taer6g04135 | . | 30 | 283 | Antiporters gene family | AT1G79900 | 31.071 | 1.05e-35 | 128.0 | |
| Taer7g00993 | . | 92 | 563 | Antiporters gene family | AT5G64290 | 78.39 | 0.0 | 765.0 | |
| Taer7g01201 | WGDA | 1 | 407 | Antiporters gene family | AT5G17630 | 70.976 | 0.0 | 541.0 | |
| Taer7g01270 | WGDA | 14 | 542 | Antiporters gene family | AT3G05030 | 74.102 | 0.0 | 813.0 | |
| Taer7g01677 | WGDA | 26 | 563 | Antiporters gene family | AT5G64290 | 75.458 | 0.0 | 821.0 | |
| Taer7g02007 | . | 44 | 590 | Antiporters gene family | AT2G19600 | 79.603 | 0.0 | 844.0 | |
| Taer8g01563 | . | 21 | 552 | Antiporters gene family | AT5G51710 | 77.715 | 0.0 | 843.0 | |
| Taer9g00019 | . | 9 | 664 | Antiporters gene family | AT5G25430 | 64.404 | 0.0 | 881.0 | |
| Taer9g00463 | . | 1 | 557 | Antiporters gene family | AT5G12860 | 80.605 | 0.0 | 880.0 | |
| Taer9g01368 | . | 1 | 697 | Antiporters gene family | AT2G47160 | 80.226 | 0.0 | 1141.0 | |
| Taer9g01448 | ACH | 1 | 526 | Antiporters gene family | AT3G05030 | 61.509 | 0.0 | 650.0 | |
| Taer9g03088 | . | 77 | 410 | Antiporters gene family | AT5G46110 | 79.586 | 0.0 | 560.0 | |
| Taer10g00827 | ACH,WGDA | 1 | 383 | Antiporters gene family | AT5G13490 | 77.546 | 0.0 | 572.0 | |
| Taer10g01446 | ACH,WGDA | 1 | 776 | Antiporters gene family | AT1G16380 | 39.136 | 0.0 | 548.0 | |
| Taer10g01711 | . | 33 | 545 | Antiporters gene family | AT1G08960 | 63.894 | 0.0 | 630.0 | |
| Taer11g00271 | . | 57 | 811 | Antiporters gene family | AT2G13620 | 69.801 | 0.0 | 1073.0 | |
| Taer11g00273 | . | 584 | 811 | Antiporters gene family | AT2G13620 | 60.526 | 2.39e-89 | 279.0 | |
| Taer11g00355 | ACH,WGDA | 1 | 385 | Antiporters gene family | AT5G54800 | 73.317 | 0.0 | 548.0 | |
| Taer11g00552 | ACH | 1 | 404 | Antiporters gene family | AT5G33320 | 64.32 | 1.00e-175 | 494.0 | |
| Taer11g00554 | ACH,WGDA | 1 | 687 | Antiporters gene family | AT3G62270 | 76.437 | 0.0 | 1088.0 | |
| Taer11g01146 | . | 127 | 193 | Antiporters gene family | AT3G05030 | 79.104 | 4.30e-31 | 111.0 | |
| Taer11g01183 | . | 798 | 860 | Antiporters gene family | AT2G01980 | 71.875 | 5.42e-24 | 94.0 | |
| Taer11g02314 | WGDA | 10 | 298 | Antiporters gene family | AT5G17400 | 36.949 | 1.24e-60 | 194.0 | |
| Taer11g02341 | WGDA | 13 | 543 | Antiporters gene family | AT3G05030 | 73.07 | 0.0 | 811.0 | |
| Taer12g00328 | . | 756 | 825 | Antiporters gene family | AT2G01980 | 62.857 | 9.64e-24 | 90.9 |