AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Taer4g02500 ATGGCATCTATTGGGTTAAGTTTCCTTCAAGTTCTTGACAACCCTTCAAAAAATCTTGACCAAAATGATGAAGTTTACATTCATCCAATGGTCAAACGTTCCAAGTCAGCATTGAGTACCAAGAGCTTAGAAATGTGTACGGAGAGTTTAGGAAGTGAAACTGGAAGTGAAATAAGTGATGAGTTTTGTGTAATTTCAATGGCTGAAAGAGAGAGATTGAGGTCAATTCAAAAGTCAAAGTGCCGGAGTTTTGACCGGAAAGTTCGCCGGAATGAGTTTCCTCCGCCGTTGACCTCCATCAGCGGCTCACATGGGTCGGTCAACGTGAGACATCATAGGGAAGGTGGAAGGTTGGTTATTAAAGCTGTGAGTGTTTCTAACTGTGGTACAAATTTTCAAGCTGAACGTACAAATGGGAGACTTAAACTTTCATTGTTGAGGGACCCGTTTGTAAATTATGAAAGTGGAAGGGTTGAAATGGAAAGTTATGAAGAAAGTGTTGAAATGAAAGAGTATGAAGAAAGTTGTGAAGTGGGATCAAATGAGGATGAGGATGAGGAGGAGGGTGGTGAGACGGTGGCGGTGGCGGAAGATGAGGAGGAGAGTGATGGTTGGCGGTGGGATATGGATGGAAACCGGTGGCGAATGGCCGGAAAAGGAGAGTTGAACATGTTAACAAGGTGTAAGGAGGGCGGAAACCAGAACAAAGTTTTTACGACTTGGAGATCATCATGGGTGGCAATTTCGTAA 750 43.47 MASIGLSFLQVLDNPSKNLDQNDEVYIHPMVKRSKSALSTKSLEMCTESLGSETGSEISDEFCVISMAERERLRSIQKSKCRSFDRKVRRNEFPPPLTSISGSHGSVNVRHHREGGRLVIKAVSVSNCGTNFQAERTNGRLKLSLLRDPFVNYESGRVEMESYEESVEMKEYEESCEVGSNEDEDEEEGGETVAVAEDEEESDGWRWDMDGNRWRMAGKGELNMLTRCKEGGNQNKVFTTWRSSWVAIS* 250
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Taer4g02500 249 MobiDBLite consensus disorder prediction 177 202 - -
Taer4g02500 249 PANTHER FANTASTIC FOUR-LIKE PROTEIN (DUF3049) 5 242 IPR021410 -
Taer4g02500 249 Pfam Fantastic Four meristem regulator 92 145 IPR046431 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Taer4g02500 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
162669 Taer4g02500 Taer6g00861
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Taer Taer-Chr12:19496487 Taer4g02500 Taer-Chr4:55512122 dispersed
Taer Taer-Chr2:85850405 Taer4g02500 Taer-Chr4:55512122 dispersed
Taer Taer-Chr4:5589766 Taer4g02500 Taer-Chr4:55512122 wgd
Taer Taer-Chr4:55512122 Taer6g00861 Taer-Chr6:5891190 wgd