AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Taer4g02503 ATGGATGCTTCAAGAACATCGTCTATTTGCTTTGGTATGGAATCTTTAGGGCTTGAAAACGACATCCCGGGCTCAAATACATATTGTAATCTAGGACTAAAACAAACATCTAAGAAGTGTCATGGAAACCCGAAAGTGTTATCACTTCTTTCTTCAATTCTTGAGAGATCTGTCCAAATGAATGAGACGTTACTCGAGAAAACACAAACTAAAGATGTTATAACGGCTTTTCATGGTTCACGAGCACCAACACTTAGCATTAAAGAGTACATTGATAGAATATTCAAGTACTCGCATTGCAGCCCATCGTGCTTTGTTGTTGCACAGGTTTACATGGATCGGTTTATTCAATGTGGAAGTGTTAATTTGACCTCTCTTAGTGTTCATCGACTTCTCATTACTAGTATAATGCTTGCTGCCAAGTTCATTGATGACGCATTTTACAACAACGCGTATTATGCAAAAGTGGGAGGAGTAACAACAGCAGAATTGAACAGATTGGAGATGAAGTTCTTATTTGGCCTGGACTTTCGGCTCCATGTCAGCCTTCGTACGTTTGGCAGATACTGTTCCCAGCTGGAAAAACTAGTTTCATGTGAGCTCCAAATGGAAAGACCGCCACGTGTGATGCACGCCCCCTGTGGACTCAAAGAAAGCTGGTCCAGCAGTGACGACTCGAGTCCTTATTCCACAACAGAGATACATATCGTATAG 714 41.46 MDASRTSSICFGMESLGLENDIPGSNTYCNLGLKQTSKKCHGNPKVLSLLSSILERSVQMNETLLEKTQTKDVITAFHGSRAPTLSIKEYIDRIFKYSHCSPSCFVVAQVYMDRFIQCGSVNLTSLSVHRLLITSIMLAAKFIDDAFYNNAYYAKVGGVTTAELNRLEMKFLFGLDFRLHVSLRTFGRYCSQLEKLVSCELQMERPPRVMHAPCGLKESWSSSDDSSPYSTTEIHIV* 238
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Taer4g02503 237 MobiDBLite consensus disorder prediction 219 237 - -
Taer4g02503 237 Pfam Cyclin 61 179 IPR013922 GO:0000079(InterPro)|GO:0019901(InterPro)
Taer4g02503 237 PANTHER UNCHARACTERIZED 41 220 IPR013922 GO:0000079(InterPro)|GO:0019901(InterPro)
Taer4g02503 237 SUPERFAMILY Cyclin-like 89 180 IPR036915 -
Taer4g02503 237 MobiDBLite consensus disorder prediction 218 237 - -
Taer4g02503 237 Gene3D - 33 213 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Taer4g02503 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Taer Taer-Chr4:55579743 Taer5g02590 Taer-Chr5:77917842 dispersed