AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Taer4g02508 ATGGTCTCTCTACGCTTCCCATTCTCATTTTCTCAGTCCATCAAAACCAAATTCCCTTCCACCTTCTCACCATCAACACTCGCCTGCTCCGTCGCTGTATCCGCCGCCGTCGGCGGCGCCATTTCATCAATCATTTCCATCTCACAAAACTCCACCAATCACAACGCATTCAACTCCTTTGTTTCCAGTTTATCACGCTCGTCTCCGTTATGGGGATCAATTTCACTTTCAGACGTTTCCGGTTCAGTTGTTACTGAATCCAAAACCGGCGTTGAGTTTCCGGCAGTTTTGAATGAGTCGTTAGGGCTTTTAGGGATTGGATTGAGGAAAAAAGCGGTGTTTGGATTGAAGAATATTGATGTTTACGCTTTCGGTGTGTACGCTGATGATAATGAGATAAAGAACTTTTTAAGTGAGAAATATGGATCACTCTCAACAACTGAACTGAAGGACAAGAACATCACTCAGGATTTGATGGAAAGTGATATAAGTGTTACAGTTAGGCTGCAAATAGTTTATGGAAAACTTAGCATTCGCTCTGTTCGTAATGCTTTTGAAGATTCTGTGGGAAACAGAATAAAAAAGTTTGCTGGATCTGAAGACAAGGAATTACTTCAAAAGTTCACTTCCCAGTTTAGAGATGAATACAAGATTCCTCGTGGATCGACCATTGACCTCTCCAAGGAAAAAGGCTATGTGCTCCGGACAGCTATTGATGGCAAAGAGATAGGAAGTGTCGAGAGCCAACTGCTGTGTCGGTCAATCTTGGATCTTTATATTGGCGACGACCCATTTGATTCAAAAGCAAAAGAAGACATTGACCTCAAACTCGTGTCTGCCATTACAAAGTAA 852 42.37 MVSLRFPFSFSQSIKTKFPSTFSPSTLACSVAVSAAVGGAISSIISISQNSTNHNAFNSFVSSLSRSSPLWGSISLSDVSGSVVTESKTGVEFPAVLNESLGLLGIGLRKKAVFGLKNIDVYAFGVYADDNEIKNFLSEKYGSLSTTELKDKNITQDLMESDISVTVRLQIVYGKLSIRSVRNAFEDSVGNRIKKFAGSEDKELLQKFTSQFRDEYKIPRGSTIDLSKEKGYVLRTAIDGKEIGSVESQLLCRSILDLYIGDDPFDSKAKEDIDLKLVSAITK* 284
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Taer4g02508 283 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 29 - -
Taer4g02508 283 Gene3D - 132 273 IPR016089 -
Taer4g02508 283 Gene3D - 86 259 IPR016088 -
Taer4g02508 283 PANTHER FATTY-ACID-BINDING PROTEIN 1 1 281 IPR044228 GO:0005504(PANTHER)|GO:0006631(PANTHER)|GO:0009570(PANTHER)
Taer4g02508 283 SUPERFAMILY Chalcone isomerase 83 281 IPR036298 GO:0016872(InterPro)
Taer4g02508 283 Pfam Chalcone isomerase like 101 273 IPR016087 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Taer4g02508 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Taer Taer-Chr4:55668300 Taer4g02509 Taer-Chr4:55682563 tandem