AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Taer4g02514 ATGGATGCCAATTCCATCGCCAAACGCCACAAATCTCCATCTCCGGCAGACGATCACTTCACCATGGACGCACTTTTAACCTCCTTTTTAGCTCTCTCCGATTCACCGTCGATTCACACGTCCTTTGATCGCCTCATTCAATCCTCCGCTTCTGATTCCGATCAGAACCGTTTGATTCAACGCGCCTTGCATCTCGGATCGCTTTTACTTGAAGCTGGAAATAGATCTGCCAGGAGATGTTCGTCTTCGCATAACGCTGTTGTTTGGCCGCTCTCACCTGACCTCACTATCAAGATTTTTTCGATGCTTGATACGCAAAGTGTGTGCTATGTTGCAGCTACATGCTCGTTTTTTCAAAAGTGTGCAATGGATCCTCTGTGTTTTGCTAACATTGACTTGGCTACATTAGTCCCTAAAGTCAATAATGCTGTGGTGTCGACGATGATCCATCGAGCTGGAAATTCACTCAAGTCTTTAAGGCTTGGTGTATTGCCAGCCATTCCTGCTCCACCTTTCTTTTCCTCTCAGCCATTAGTTTATAGCATTAGGAATGCAAACGACGCATCAGGATTTTCATGGAATGACAAGAAATCAAGGCAGGGAAAGGAATCCTCCATTCTAACAAGATCCTGTCTGAATTCTTTGAGCGGCAATGGTGGTGCACCTGGGTATGGGGTCCATTTGAGAAGATTACACCTTTACAACATTGAACGAATGGATAATGCATCCCTCTTGACATCATTATCAGCTTGTCCCTCTCTCCTTGATCTAGAAATTGTGGGCCTGCATGTTGAATTGAGGCATACGTTGGAGTCAATAAGTAGAAATTGTCCCTTGATAGAACGTTTGATTTTTGAATCTTCAAAAACAGGTAGAGATGATGGTTTGAAATTCCCAACATGCAATGAATTTGTCCAAAACTGTCCTAACATAACCACTTTAGCACTAAAAGGATTTAAGCTACATGACTACAAAGCTCGTATGCTGGTAAAGGGGTTACGAAGATTGAAACATCTTGATCTTTCAACATCTTACTCATTCACTGGCGCATTTTTGAAAAATGTTAGTAGCAATGGCGGTGGAGATAAGTTGGAGGTGATAATTTTACGGGACTGTATGCATTTAAAGGAAATTGAAGTCGAGCGGTTTATGGTTGCTGTTCTTGCAGGGGAATTCAAACTCCTTAGACATCTTGATATATCTAACAGGGAAGGTCTTGCATGTGAGGGTGACTGGAGTAACAGATGTTACAGTGCCAGCTTTATTCCTATACAACAATTATTGGAACAGAGGCCTGATTTTTGTATTGTAGCTGAATTCCCAAAAGGAAGTTACATTGACATTGATCAAATGTCAGGCATGTCAGGCAGTGACGTAAATTTACCATCACAGTCGAGCAGTAGCCATATGTCTGATGGCTCGACCACATCAGATGGGAGTTATAATAGCGATCATGGTAGTGGTAATGAGTACGGTAGAGAAAGTGGTTTCGCGACTTATGAAGAAAATTCAGACTATATGCTGAGTTTATAA 1533 42.14 MDANSIAKRHKSPSPADDHFTMDALLTSFLALSDSPSIHTSFDRLIQSSASDSDQNRLIQRALHLGSLLLEAGNRSARRCSSSHNAVVWPLSPDLTIKIFSMLDTQSVCYVAATCSFFQKCAMDPLCFANIDLATLVPKVNNAVVSTMIHRAGNSLKSLRLGVLPAIPAPPFFSSQPLVYSIRNANDASGFSWNDKKSRQGKESSILTRSCLNSLSGNGGAPGYGVHLRRLHLYNIERMDNASLLTSLSACPSLLDLEIVGLHVELRHTLESISRNCPLIERLIFESSKTGRDDGLKFPTCNEFVQNCPNITTLALKGFKLHDYKARMLVKGLRRLKHLDLSTSYSFTGAFLKNVSSNGGGDKLEVIILRDCMHLKEIEVERFMVAVLAGEFKLLRHLDISNREGLACEGDWSNRCYSASFIPIQQLLEQRPDFCIVAEFPKGSYIDIDQMSGMSGSDVNLPSQSSSSHMSDGSTTSDGSYNSDHGSGNEYGRESGFATYEENSDYMLSL* 511
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Taer4g02514 510 MobiDBLite consensus disorder prediction 456 496 - -
Taer4g02514 510 Gene3D Ribonuclease Inhibitor 86 410 IPR032675 -
Taer4g02514 510 PANTHER F-BOX-TPR REPEAT PROTEIN POF3 89 441 - GO:0019005(PANTHER)|GO:0031146(PANTHER)
Taer4g02514 510 MobiDBLite consensus disorder prediction 456 489 - -
Taer4g02514 510 SUPERFAMILY F-box domain 79 133 IPR036047 GO:0005515(InterPro)
Taer4g02514 510 SUPERFAMILY RNI-like 224 402 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Taer4g02514 - -
leaf

Event-related genes

Select Gene_1 Gene_2 Event_name
161932 Taer1g03068 Taer4g02514
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Taer Taer-Chr1:34122588 Taer4g02514 Taer-Chr4:55772120 wgd